Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 TREX1-205ENST00000625293 1783 ntBASIC20.44■□□□□ 0.86
C9orf72Q96LT7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 FAM21FP-204ENST00000608637 956 ntBASIC20.43■□□□□ 0.86
C9orf72Q96LT7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.43■□□□□ 0.86
C9orf72Q96LT7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf72Q96LT7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.42■□□□□ 0.86
C9orf72Q96LT7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 AC007322.1-201ENST00000426983 750 ntBASIC20.42■□□□□ 0.86
C9orf72Q96LT7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 AC104771.1-201ENST00000603335 964 ntBASIC20.42■□□□□ 0.86
C9orf72Q96LT7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf72Q96LT7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf72Q96LT7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 AL109923.1-201ENST00000618799 583 ntBASIC20.4■□□□□ 0.86
C9orf72Q96LT7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
C9orf72Q96LT7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
C9orf72Q96LT7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
C9orf72Q96LT7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.39■□□□□ 0.86
C9orf72Q96LT7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
C9orf72Q96LT7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
C9orf72Q96LT7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.39■□□□□ 0.85
C9orf72Q96LT7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms