Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RITA1Q96K30 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RITA1Q96K30 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RITA1Q96K30 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
RITA1Q96K30 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RITA1Q96K30 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RITA1Q96K30 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RITA1Q96K30 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RITA1Q96K30 AC073210.2-201ENST00000430369 194 ntBASIC15.97■□□□□ 0.15
RITA1Q96K30 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.97■□□□□ 0.15
RITA1Q96K30 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.97■□□□□ 0.15
RITA1Q96K30 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.97■□□□□ 0.15
RITA1Q96K30 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RITA1Q96K30 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
RITA1Q96K30 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.97■□□□□ 0.15
RITA1Q96K30 AC006557.6-201ENST00000623071 864 ntBASIC15.97■□□□□ 0.15
RITA1Q96K30 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RITA1Q96K30 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RITA1Q96K30 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RITA1Q96K30 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RITA1Q96K30 AL158211.5-201ENST00000623583 2518 ntBASIC15.97■□□□□ 0.15
RITA1Q96K30 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RITA1Q96K30 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RITA1Q96K30 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RITA1Q96K30 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.96■□□□□ 0.15
RITA1Q96K30 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RITA1Q96K30 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.96■□□□□ 0.15
RITA1Q96K30 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.96■□□□□ 0.15
RITA1Q96K30 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.96■□□□□ 0.15
RITA1Q96K30 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.96■□□□□ 0.15
RITA1Q96K30 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
RITA1Q96K30 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RITA1Q96K30 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RITA1Q96K30 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.96■□□□□ 0.15
RITA1Q96K30 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
RITA1Q96K30 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.96■□□□□ 0.14
RITA1Q96K30 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RITA1Q96K30 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.95■□□□□ 0.14
RITA1Q96K30 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
RITA1Q96K30 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.95■□□□□ 0.14
RITA1Q96K30 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.95■□□□□ 0.14
RITA1Q96K30 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RITA1Q96K30 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.95■□□□□ 0.14
RITA1Q96K30 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.95■□□□□ 0.14
RITA1Q96K30 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
RITA1Q96K30 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.95■□□□□ 0.14
RITA1Q96K30 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.95■□□□□ 0.14
RITA1Q96K30 AC005829.2-201ENST00000571422 1056 ntBASIC15.95■□□□□ 0.14
RITA1Q96K30 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.95■□□□□ 0.14
RITA1Q96K30 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.95■□□□□ 0.14
RITA1Q96K30 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.95■□□□□ 0.14
RITA1Q96K30 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RITA1Q96K30 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RITA1Q96K30 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.95■□□□□ 0.14
RITA1Q96K30 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RITA1Q96K30 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.95■□□□□ 0.14
RITA1Q96K30 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.94■□□□□ 0.14
RITA1Q96K30 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RITA1Q96K30 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RITA1Q96K30 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.94■□□□□ 0.14
RITA1Q96K30 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RITA1Q96K30 TMEM179-206ENST00000616017 1645 ntBASIC15.94■□□□□ 0.14
RITA1Q96K30 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RITA1Q96K30 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RITA1Q96K30 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.94■□□□□ 0.14
RITA1Q96K30 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RITA1Q96K30 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RITA1Q96K30 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms