Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 FSCN1P1-201ENST00000568912 1481 ntBASIC16.92■□□□□ 0.3
SPG11Q96JI7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 CLEC4GP1-201ENST00000596555 870 ntBASIC16.92■□□□□ 0.3
SPG11Q96JI7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.92■□□□□ 0.3
SPG11Q96JI7 AC139887.4-201ENST00000607877 719 ntBASIC16.92■□□□□ 0.3
SPG11Q96JI7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.92■□□□□ 0.3
SPG11Q96JI7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.92■□□□□ 0.3
SPG11Q96JI7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SPG11Q96JI7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.92■□□□□ 0.3
SPG11Q96JI7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.92■□□□□ 0.3
SPG11Q96JI7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.92■□□□□ 0.3
SPG11Q96JI7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPG11Q96JI7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.91■□□□□ 0.3
SPG11Q96JI7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 SLC25A1P4-201ENST00000567977 778 ntBASIC16.91■□□□□ 0.3
SPG11Q96JI7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.91■□□□□ 0.3
SPG11Q96JI7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.91■□□□□ 0.3
SPG11Q96JI7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.91■□□□□ 0.3
SPG11Q96JI7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.91■□□□□ 0.3
SPG11Q96JI7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.91■□□□□ 0.3
SPG11Q96JI7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.91■□□□□ 0.3
SPG11Q96JI7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPG11Q96JI7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPG11Q96JI7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPG11Q96JI7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPG11Q96JI7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 AC006538.3-201ENST00000612495 578 ntBASIC16.9■□□□□ 0.3
SPG11Q96JI7 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.9■□□□□ 0.3
SPG11Q96JI7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPG11Q96JI7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 AC023511.2-201ENST00000618803 211 ntBASIC16.9■□□□□ 0.3
SPG11Q96JI7 AL138966.2-201ENST00000621997 464 ntBASIC16.9■□□□□ 0.3
SPG11Q96JI7 AL121956.5-201ENST00000625261 221 ntBASIC16.9■□□□□ 0.3
SPG11Q96JI7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SPG11Q96JI7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPG11Q96JI7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPG11Q96JI7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPG11Q96JI7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPG11Q96JI7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPG11Q96JI7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPG11Q96JI7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPG11Q96JI7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPG11Q96JI7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.89■□□□□ 0.29
SPG11Q96JI7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.89■□□□□ 0.29
SPG11Q96JI7 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.89■□□□□ 0.29
SPG11Q96JI7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SPG11Q96JI7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPG11Q96JI7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPG11Q96JI7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPG11Q96JI7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPG11Q96JI7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SPG11Q96JI7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.89■□□□□ 0.29
SPG11Q96JI7 AC010203.1-204ENST00000548782 407 ntBASIC16.89■□□□□ 0.29
SPG11Q96JI7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPG11Q96JI7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.89■□□□□ 0.29
SPG11Q96JI7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPG11Q96JI7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPG11Q96JI7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.88■□□□□ 0.29
SPG11Q96JI7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.88■□□□□ 0.29
SPG11Q96JI7 AC007663.1-201ENST00000438948 1240 ntBASIC16.88■□□□□ 0.29
SPG11Q96JI7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.88■□□□□ 0.29
SPG11Q96JI7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.88■□□□□ 0.29
SPG11Q96JI7 DGCR10-201ENST00000609839 495 ntBASIC16.88■□□□□ 0.29
SPG11Q96JI7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms