Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.9■□□□□ 0.78
ARRDC3Q96B67 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
ARRDC3Q96B67 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.89■□□□□ 0.77
ARRDC3Q96B67 AC004264.1-201ENST00000608354 794 ntBASIC19.89■□□□□ 0.77
ARRDC3Q96B67 AP001412.1-201ENST00000608405 714 ntBASIC19.89■□□□□ 0.77
ARRDC3Q96B67 AC018553.1-201ENST00000616682 1458 ntBASIC19.89■□□□□ 0.77
ARRDC3Q96B67 BX119927.1-201ENST00000636596 1552 ntBASIC19.89■□□□□ 0.77
ARRDC3Q96B67 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 TFP1-202ENST00000475455 1573 ntBASIC19.88■□□□□ 0.77
ARRDC3Q96B67 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.88■□□□□ 0.77
ARRDC3Q96B67 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 AF186192.3-201ENST00000583427 947 ntBASIC19.88■□□□□ 0.77
ARRDC3Q96B67 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARRDC3Q96B67 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ARRDC3Q96B67 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.87■□□□□ 0.77
ARRDC3Q96B67 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ARRDC3Q96B67 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.87■□□□□ 0.77
ARRDC3Q96B67 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ARRDC3Q96B67 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.87■□□□□ 0.77
ARRDC3Q96B67 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.87■□□□□ 0.77
ARRDC3Q96B67 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ARRDC3Q96B67 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ARRDC3Q96B67 PHGDH-210ENST00000641115 1638 ntBASIC19.87■□□□□ 0.77
ARRDC3Q96B67 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 AP005212.1-201ENST00000581547 1997 ntBASIC19.86■□□□□ 0.77
ARRDC3Q96B67 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.86■□□□□ 0.77
ARRDC3Q96B67 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ARRDC3Q96B67 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ARRDC3Q96B67 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ARRDC3Q96B67 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ARRDC3Q96B67 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ARRDC3Q96B67 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ARRDC3Q96B67 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ARRDC3Q96B67 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ARRDC3Q96B67 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ARRDC3Q96B67 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ARRDC3Q96B67 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.85■□□□□ 0.77
ARRDC3Q96B67 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms