Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 DUX4L7-201ENST00000630678 1275 ntBASIC17.56■□□□□ 0.4
RFT1Q96AA3 DUX4L5-201ENST00000630834 1275 ntBASIC17.56■□□□□ 0.4
RFT1Q96AA3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFT1Q96AA3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFT1Q96AA3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFT1Q96AA3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFT1Q96AA3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFT1Q96AA3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 AC020763.4-201ENST00000623414 4170 ntBASIC17.55■□□□□ 0.4
RFT1Q96AA3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.55■□□□□ 0.4
RFT1Q96AA3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFT1Q96AA3 AC093484.2-201ENST00000580996 2166 ntBASIC17.55■□□□□ 0.4
RFT1Q96AA3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFT1Q96AA3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFT1Q96AA3 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFT1Q96AA3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFT1Q96AA3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFT1Q96AA3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 AC005082.1-201ENST00000413042 2259 ntBASIC17.54■□□□□ 0.4
RFT1Q96AA3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFT1Q96AA3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFT1Q96AA3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.53■□□□□ 0.4
RFT1Q96AA3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.53■□□□□ 0.4
RFT1Q96AA3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.53■□□□□ 0.4
RFT1Q96AA3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.53■□□□□ 0.4
RFT1Q96AA3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.53■□□□□ 0.4
RFT1Q96AA3 TERF1P2-201ENST00000583350 1212 ntBASIC17.53■□□□□ 0.4
RFT1Q96AA3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
RFT1Q96AA3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RFT1Q96AA3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 AC116050.2-201ENST00000612102 1779 ntBASIC17.53■□□□□ 0.4
RFT1Q96AA3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.53■□□□□ 0.4
RFT1Q96AA3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFT1Q96AA3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.52■□□□□ 0.4
RFT1Q96AA3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFT1Q96AA3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RFT1Q96AA3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.52■□□□□ 0.4
RFT1Q96AA3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFT1Q96AA3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFT1Q96AA3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms