Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF25Q93038 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.65■■□□□ 1.22
TNFRSF25Q93038 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
TNFRSF25Q93038 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.64■■□□□ 1.22
TNFRSF25Q93038 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.64■■□□□ 1.22
TNFRSF25Q93038 TFP1-202ENST00000475455 1573 ntBASIC22.64■■□□□ 1.22
TNFRSF25Q93038 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.64■■□□□ 1.22
TNFRSF25Q93038 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TNFRSF25Q93038 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.64■■□□□ 1.22
TNFRSF25Q93038 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.64■■□□□ 1.22
TNFRSF25Q93038 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNFRSF25Q93038 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 RNA5SP413-201ENST00000516373 109 ntBASIC22.63■■□□□ 1.21
TNFRSF25Q93038 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 AC008687.6-201ENST00000596318 630 ntBASIC22.63■■□□□ 1.21
TNFRSF25Q93038 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 TREX1-205ENST00000625293 1783 ntBASIC22.63■■□□□ 1.21
TNFRSF25Q93038 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF25Q93038 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TNFRSF25Q93038 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms