Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF4Q92544 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF4Q92544 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.75■□□□□ 0.59
TM9SF4Q92544 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF4Q92544 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF4Q92544 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF4Q92544 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF4Q92544 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF4Q92544 AC233263.1-201ENST00000578059 224 ntBASIC18.75■□□□□ 0.59
TM9SF4Q92544 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 AC073912.3-201ENST00000624414 853 ntBASIC18.75■□□□□ 0.59
TM9SF4Q92544 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF4Q92544 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF4Q92544 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF4Q92544 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TM9SF4Q92544 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 AL135905.2-201ENST00000584934 1404 ntBASIC18.74■□□□□ 0.59
TM9SF4Q92544 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 AC239809.2-201ENST00000415381 517 ntBASIC18.74■□□□□ 0.59
TM9SF4Q92544 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 AC012618.2-201ENST00000428058 849 ntBASIC18.74■□□□□ 0.59
TM9SF4Q92544 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TM9SF4Q92544 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF4Q92544 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 SNORA78-201ENST00000459373 127 ntBASIC18.73■□□□□ 0.59
TM9SF4Q92544 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 AC005829.2-201ENST00000571422 1056 ntBASIC18.73■□□□□ 0.59
TM9SF4Q92544 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF4Q92544 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF4Q92544 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms