Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 AL358852.1-201ENST00000623174 1268 ntBASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB1Q8WWH5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 AC120498.9-201ENST00000339021 3867 ntBASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 AC079140.4-201ENST00000507448 529 ntBASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 AL354811.1-201ENST00000610286 706 ntBASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRUB1Q8WWH5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 RASA4CP-201ENST00000424092 1398 ntBASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRUB1Q8WWH5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 AC010141.2-201ENST00000452426 721 ntBASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 FAM21FP-204ENST00000608637 956 ntBASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 AL355001.2-201ENST00000620617 1191 ntBASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms