Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 AC009113.1-201ENST00000570267 2443 ntBASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 AL390961.4-201ENST00000623958 2535 ntBASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 AC104581.1-202ENST00000635932 2618 ntBASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMIM4Q8WVI0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 AC135050.7-201ENST00000624508 2218 ntBASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMIM4Q8WVI0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms