Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 KRT18P61-201ENST00000585825 1298 ntBASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 KRT18P14-201ENST00000534205 1250 ntBASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 AL162412.1-201ENST00000567129 965 ntBASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 AL031963.3-201ENST00000606441 850 ntBASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 MYCNOS-205ENST00000641950 531 ntBASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.4■□□□□ 0.38
RPS4Y2Q8TD47 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.39■□□□□ 0.38
RPS4Y2Q8TD47 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RPS4Y2Q8TD47 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RPS4Y2Q8TD47 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RPS4Y2Q8TD47 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.39■□□□□ 0.38
RPS4Y2Q8TD47 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 UBE2DNL-204ENST00000602536 740 ntBASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4Y2Q8TD47 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 AL591742.1-201ENST00000604433 565 ntBASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 KRT16P6-202ENST00000425692 1426 ntBASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4Y2Q8TD47 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms