Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CLDND2Q8NHS1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 AL390719.1-204ENST00000412397 1219 ntBASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDND2Q8NHS1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 AC120498.8-201ENST00000614275 531 ntBASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 AC027702.1-201ENST00000563810 1770 ntBASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDND2Q8NHS1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDND2Q8NHS1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms