Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 AC069152.1-201ENST00000438030 544 ntBASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM35BQ8NCS4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM35BQ8NCS4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.08■□□□□ 0.96
TMEM35BQ8NCS4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
TMEM35BQ8NCS4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM35BQ8NCS4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.08■□□□□ 0.96
TMEM35BQ8NCS4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM35BQ8NCS4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM35BQ8NCS4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.08■□□□□ 0.96
TMEM35BQ8NCS4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
TMEM35BQ8NCS4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 HLA-L-209ENST00000420110 1011 ntBASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM35BQ8NCS4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 HLA-B-256ENST00000639848 1089 ntBASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 AC009237.14-201ENST00000609975 1594 ntBASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35BQ8NCS4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 PHGDH-210ENST00000641115 1638 ntBASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 AC083880.1-201ENST00000608266 535 ntBASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TMEM35BQ8NCS4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 ID1-201ENST00000376105 1233 ntBASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 AL355802.2-201ENST00000402069 882 ntBASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 AP001271.2-201ENST00000624018 1556 ntBASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35BQ8NCS4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms