Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRIML2Q8N7C3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 AC019069.1-201ENST00000610008 1333 ntBASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIML2Q8N7C3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIML2Q8N7C3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIML2Q8N7C3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.14■□□□□ 0.66
TRIML2Q8N7C3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.14■□□□□ 0.66
TRIML2Q8N7C3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRIML2Q8N7C3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.14■□□□□ 0.66
TRIML2Q8N7C3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRIML2Q8N7C3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TRIML2Q8N7C3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 PGM5P4-201ENST00000421970 445 ntBASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 AC097381.1-201ENST00000429019 1296 ntBASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 KRT8P36-201ENST00000489121 1440 ntBASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIML2Q8N7C3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms