Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC00311Q8N616 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00311Q8N616 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00311Q8N616 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC00311Q8N616 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00311Q8N616 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LINC00311Q8N616 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
LINC00311Q8N616 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 AC116351.2-201ENST00000606540 1585 ntBASIC16.14■□□□□ 0.17
LINC00311Q8N616 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00311Q8N616 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00311Q8N616 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00311Q8N616 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00311Q8N616 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00311Q8N616 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00311Q8N616 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00311Q8N616 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00311Q8N616 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00311Q8N616 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00311Q8N616 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00311Q8N616 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00311Q8N616 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00311Q8N616 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00311Q8N616 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00311Q8N616 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.12■□□□□ 0.17
LINC00311Q8N616 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00311Q8N616 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00311Q8N616 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00311Q8N616 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00311Q8N616 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.12■□□□□ 0.17
LINC00311Q8N616 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.12■□□□□ 0.17
LINC00311Q8N616 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.12■□□□□ 0.17
LINC00311Q8N616 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.12■□□□□ 0.17
LINC00311Q8N616 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.12■□□□□ 0.17
LINC00311Q8N616 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.12■□□□□ 0.17
LINC00311Q8N616 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.12■□□□□ 0.17
LINC00311Q8N616 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00311Q8N616 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00311Q8N616 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00311Q8N616 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.12■□□□□ 0.17
LINC00311Q8N616 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LINC00311Q8N616 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00311Q8N616 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00311Q8N616 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC00311Q8N616 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC00311Q8N616 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 AC018553.1-201ENST00000616682 1458 ntBASIC16.11■□□□□ 0.17
LINC00311Q8N616 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC00311Q8N616 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC00311Q8N616 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LINC00311Q8N616 AL355802.2-201ENST00000402069 882 ntBASIC16.11■□□□□ 0.17
LINC00311Q8N616 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC00311Q8N616 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.11■□□□□ 0.17
LINC00311Q8N616 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 AC006557.6-201ENST00000623071 864 ntBASIC16.11■□□□□ 0.17
LINC00311Q8N616 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms