Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 TFP1-202ENST00000475455 1573 ntBASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 LINC01521-201ENST00000504184 1943 ntBASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 PHGDH-210ENST00000641115 1638 ntBASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ARHGEF39Q8N4T4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 AL691432.2-201ENST00000607222 2038 ntBASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 AL158047.1-201ENST00000445918 881 ntBASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARHGEF39Q8N4T4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 AC018553.1-201ENST00000616682 1458 ntBASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 AL391422.3-201ENST00000603791 2761 ntBASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.79■□□□□ 0.6
ARHGEF39Q8N4T4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 KRASP1-201ENST00000407852 552 ntBASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 AC239809.2-201ENST00000415381 517 ntBASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 AC066615.1-201ENST00000640911 628 ntBASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF39Q8N4T4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms