Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 TSPY14P-201ENST00000303979 915 ntBASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 AC018553.1-201ENST00000616682 1458 ntBASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.87■□□□□ 0.61
COL27A1Q8IZC6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL27A1Q8IZC6 RCC2P6-201ENST00000526625 1557 ntBASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 AP006587.1-201ENST00000534129 1502 ntBASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 DPP3P2-201ENST00000416030 1696 ntBASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL27A1Q8IZC6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 AF106564.1-201ENST00000607058 2553 ntBASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 AL137013.1-201ENST00000432946 1228 ntBASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 AC097488.1-201ENST00000507834 756 ntBASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL27A1Q8IZC6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.83■□□□□ 0.61
COL27A1Q8IZC6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL27A1Q8IZC6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL27A1Q8IZC6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL27A1Q8IZC6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL27A1Q8IZC6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL27A1Q8IZC6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL27A1Q8IZC6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.83■□□□□ 0.61
COL27A1Q8IZC6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 AL590326.2-201ENST00000625139 305 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms