Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APLFQ8IW19 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APLFQ8IW19 AC026471.6-201ENST00000622954 1905 ntBASIC19.63■□□□□ 0.73
APLFQ8IW19 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APLFQ8IW19 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.63■□□□□ 0.73
APLFQ8IW19 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APLFQ8IW19 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APLFQ8IW19 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APLFQ8IW19 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.63■□□□□ 0.73
APLFQ8IW19 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
APLFQ8IW19 AC093787.1-201ENST00000450396 207 ntBASIC19.63■□□□□ 0.73
APLFQ8IW19 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.63■□□□□ 0.73
APLFQ8IW19 AC093827.2-201ENST00000512654 315 ntBASIC19.63■□□□□ 0.73
APLFQ8IW19 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.63■□□□□ 0.73
APLFQ8IW19 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.63■□□□□ 0.73
APLFQ8IW19 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APLFQ8IW19 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APLFQ8IW19 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
APLFQ8IW19 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APLFQ8IW19 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.63■□□□□ 0.73
APLFQ8IW19 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.62■□□□□ 0.73
APLFQ8IW19 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
APLFQ8IW19 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.62■□□□□ 0.73
APLFQ8IW19 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.62■□□□□ 0.73
APLFQ8IW19 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
APLFQ8IW19 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.62■□□□□ 0.73
APLFQ8IW19 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.62■□□□□ 0.73
APLFQ8IW19 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
APLFQ8IW19 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.62■□□□□ 0.73
APLFQ8IW19 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.62■□□□□ 0.73
APLFQ8IW19 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.62■□□□□ 0.73
APLFQ8IW19 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
APLFQ8IW19 AC016405.3-201ENST00000607710 860 ntBASIC19.62■□□□□ 0.73
APLFQ8IW19 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.62■□□□□ 0.73
APLFQ8IW19 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
APLFQ8IW19 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
APLFQ8IW19 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APLFQ8IW19 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.62■□□□□ 0.73
APLFQ8IW19 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
APLFQ8IW19 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.61■□□□□ 0.73
APLFQ8IW19 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
APLFQ8IW19 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.61■□□□□ 0.73
APLFQ8IW19 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.61■□□□□ 0.73
APLFQ8IW19 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.61■□□□□ 0.73
APLFQ8IW19 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.61■□□□□ 0.73
APLFQ8IW19 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.61■□□□□ 0.73
APLFQ8IW19 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.61■□□□□ 0.73
APLFQ8IW19 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.61■□□□□ 0.73
APLFQ8IW19 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.61■□□□□ 0.73
APLFQ8IW19 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.61■□□□□ 0.73
APLFQ8IW19 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.61■□□□□ 0.73
APLFQ8IW19 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.61■□□□□ 0.73
APLFQ8IW19 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
APLFQ8IW19 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.61■□□□□ 0.73
APLFQ8IW19 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.61■□□□□ 0.73
APLFQ8IW19 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
APLFQ8IW19 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
APLFQ8IW19 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
APLFQ8IW19 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
APLFQ8IW19 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
APLFQ8IW19 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.6■□□□□ 0.73
APLFQ8IW19 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APLFQ8IW19 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APLFQ8IW19 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.6■□□□□ 0.73
APLFQ8IW19 BX276092.2-201ENST00000417668 665 ntBASIC19.6■□□□□ 0.73
APLFQ8IW19 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.6■□□□□ 0.73
APLFQ8IW19 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
APLFQ8IW19 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
APLFQ8IW19 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.6■□□□□ 0.73
APLFQ8IW19 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.6■□□□□ 0.73
APLFQ8IW19 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APLFQ8IW19 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APLFQ8IW19 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APLFQ8IW19 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APLFQ8IW19 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.6■□□□□ 0.73
APLFQ8IW19 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms