Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CDV3P1-201ENST00000471403 739 ntBASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD3Q8IVD9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 AC009237.14-201ENST00000609975 1594 ntBASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD3Q8IVD9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 LINC02228-203ENST00000641970 1355 ntBASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 AC027612.3-201ENST00000413684 1047 ntBASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 PGM5P4-201ENST00000421970 445 ntBASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 SLC7A5P1-201ENST00000568957 537 ntBASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUDCD3Q8IVD9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 AL356652.1-201ENST00000615962 565 ntBASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
NUDCD3Q8IVD9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms