Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LYSMD2Q8IV50 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 AC009299.2-201ENST00000482477 511 ntBASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 AC092171.4-201ENST00000609130 632 ntBASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 AL354751.1-201ENST00000412768 1863 ntBASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 AC090164.3-201ENST00000610780 2143 ntBASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD2Q8IV50 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 AL356740.2-201ENST00000601559 647 ntBASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 AC106820.2-201ENST00000563775 3264 ntBASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.44■□□□□ 0.38
LYSMD2Q8IV50 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 BICD1-207ENST00000551848 1962 ntBASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD2Q8IV50 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 SRD5A1P1-201ENST00000442297 786 ntBASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 SLC47A1P1-202ENST00000449666 945 ntBASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 SMUG1P1-201ENST00000590640 811 ntBASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms