Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC28Q86X40 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC28Q86X40 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRC28Q86X40 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC28Q86X40 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRRC28Q86X40 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 AC120498.10-201ENST00000621827 505 ntBASIC17.65■□□□□ 0.42
LRRC28Q86X40 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRRC28Q86X40 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC28Q86X40 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRRC28Q86X40 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
LRRC28Q86X40 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LRRC28Q86X40 TMEM179-206ENST00000616017 1645 ntBASIC17.65■□□□□ 0.42
LRRC28Q86X40 AC093484.2-201ENST00000580996 2166 ntBASIC17.64■□□□□ 0.42
LRRC28Q86X40 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC28Q86X40 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRC28Q86X40 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRRC28Q86X40 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC28Q86X40 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC28Q86X40 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC28Q86X40 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 SLC7A5P2-201ENST00000553010 536 ntBASIC17.64■□□□□ 0.41
LRRC28Q86X40 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LRRC28Q86X40 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
LRRC28Q86X40 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC28Q86X40 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 AC026185.1-201ENST00000445748 174 ntBASIC17.63■□□□□ 0.41
LRRC28Q86X40 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 RAP2CP1-201ENST00000605103 478 ntBASIC17.63■□□□□ 0.41
LRRC28Q86X40 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC28Q86X40 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC28Q86X40 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 AC093503.3-201ENST00000624917 2352 ntBASIC17.62■□□□□ 0.41
LRRC28Q86X40 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 DUX4L16-201ENST00000555130 1264 ntBASIC17.62■□□□□ 0.41
LRRC28Q86X40 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms