Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 AC016769.1-201ENST00000409132 1010 ntBASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 AL162412.1-201ENST00000567129 965 ntBASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 MIR6821-201ENST00000617625 74 ntBASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL55Q7Z7F7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL55Q7Z7F7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC12.77□□□□□ -0.36
MRPL55Q7Z7F7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL55Q7Z7F7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL55Q7Z7F7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL55Q7Z7F7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
MRPL55Q7Z7F7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 AC007322.4-201ENST00000509611 723 ntBASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 BID-204ENST00000399767 2129 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC12.77□□□□□ -0.37
MRPL55Q7Z7F7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 CYP21A1P-202ENST00000354927 1481 ntBASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms