Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 TMPOP1-202ENST00000424642 1267 ntBASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 AC073195.1-201ENST00000607241 877 ntBASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 AC007225.1-201ENST00000566331 1836 ntBASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 AC113347.1-201ENST00000413321 391 ntBASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 AC145285.6-201ENST00000604632 637 ntBASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 AL355355.2-201ENST00000442321 338 ntBASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 C1QL1P1-201ENST00000568105 661 ntBASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 AC092865.7-201ENST00000641832 219 ntBASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.03■□□□□ 0.32
RAI1Q7Z5J4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI1Q7Z5J4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAI1Q7Z5J4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAI1Q7Z5J4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.02■□□□□ 0.31
RAI1Q7Z5J4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAI1Q7Z5J4 AL157384.1-201ENST00000445995 2473 ntBASIC17.02■□□□□ 0.31
RAI1Q7Z5J4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.02■□□□□ 0.31
RAI1Q7Z5J4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAI1Q7Z5J4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.02■□□□□ 0.31
RAI1Q7Z5J4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.31
RAI1Q7Z5J4 AC004264.1-201ENST00000608354 794 ntBASIC17.02■□□□□ 0.31
RAI1Q7Z5J4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 MMP23A-201ENST00000234610 1017 ntBASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 KRT18P35-201ENST00000510488 1269 ntBASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 AP005212.1-201ENST00000581547 1997 ntBASIC17.01■□□□□ 0.31
RAI1Q7Z5J4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAI1Q7Z5J4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAI1Q7Z5J4 KSR1P1-201ENST00000446298 240 ntBASIC17■□□□□ 0.31
RAI1Q7Z5J4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17■□□□□ 0.31
RAI1Q7Z5J4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAI1Q7Z5J4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAI1Q7Z5J4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAI1Q7Z5J4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAI1Q7Z5J4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RAI1Q7Z5J4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAI1Q7Z5J4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAI1Q7Z5J4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAI1Q7Z5J4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI1Q7Z5J4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms