Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BHLHA9Q7RTU4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BHLHA9Q7RTU4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
BHLHA9Q7RTU4 AC112907.3-201ENST00000577781 2400 ntBASIC20.73■□□□□ 0.91
BHLHA9Q7RTU4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 KRASP1-201ENST00000407852 552 ntBASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
BHLHA9Q7RTU4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 AC239809.2-201ENST00000415381 517 ntBASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BHLHA9Q7RTU4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BHLHA9Q7RTU4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
BHLHA9Q7RTU4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 AC066615.1-201ENST00000640911 628 ntBASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms