Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 KSR1P1-201ENST00000446298 240 ntBASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 NAPSB-206ENST00000562112 1266 ntBASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 FP700111.2-201ENST00000619190 1892 ntBASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC149Q6ZUS6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 KRT18P57-201ENST00000443599 1254 ntBASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC149Q6ZUS6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 NIFKP9-201ENST00000419265 221 ntBASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 KRT18P22-201ENST00000402024 1347 ntBASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC149Q6ZUS6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 KRT16P6-202ENST00000425692 1426 ntBASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 AP006587.1-201ENST00000534129 1502 ntBASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 AC006128.1-201ENST00000624704 1661 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms