Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 AC092368.3-202ENST00000574180 1591 ntBASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
COLCA1Q6ZS62 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
COLCA1Q6ZS62 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 PNMA6B-201ENST00000538162 1200 ntBASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
COLCA1Q6ZS62 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 AC116351.2-201ENST00000606540 1585 ntBASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COLCA1Q6ZS62 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 AL355802.2-201ENST00000402069 882 ntBASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COLCA1Q6ZS62 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms