Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 RPPH1-201ENST00000516869 333 ntBASIC21.19■□□□□ 0.98
VSTM1Q6UX27 C1QBPP2-201ENST00000528754 825 ntBASIC21.19■□□□□ 0.98
VSTM1Q6UX27 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
VSTM1Q6UX27 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 MTDHP1-201ENST00000605323 784 ntBASIC21.18■□□□□ 0.98
VSTM1Q6UX27 AL031963.3-201ENST00000606441 850 ntBASIC21.18■□□□□ 0.98
VSTM1Q6UX27 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 AP006294.2-201ENST00000641667 209 ntBASIC21.18■□□□□ 0.98
VSTM1Q6UX27 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 KRT8P20-201ENST00000423953 1409 ntBASIC21.18■□□□□ 0.98
VSTM1Q6UX27 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.18■□□□□ 0.98
VSTM1Q6UX27 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 UBE2SP1-201ENST00000450587 669 ntBASIC21.17■□□□□ 0.98
VSTM1Q6UX27 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VSTM1Q6UX27 PCDHAC2-203ENST00000615316 3011 ntBASIC21.17■□□□□ 0.98
VSTM1Q6UX27 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VSTM1Q6UX27 AC092720.2-201ENST00000602388 1665 ntBASIC21.15■□□□□ 0.98
VSTM1Q6UX27 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.15■□□□□ 0.98
VSTM1Q6UX27 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms