Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 MIR4785-201ENST00000585005 73 ntBASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DCLRE1AQ6PJP8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 SLC25A24-204ENST00000569674 2357 ntBASIC21.29■■□□□ 1
DCLRE1AQ6PJP8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 KRT18P21-201ENST00000515767 1272 ntBASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
DCLRE1AQ6PJP8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 BX088651.1-201ENST00000540551 451 ntBASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.27■■□□□ 1
DCLRE1AQ6PJP8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.27■□□□□ 0.99
DCLRE1AQ6PJP8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
DCLRE1AQ6PJP8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 AC116351.2-201ENST00000606540 1585 ntBASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.26■□□□□ 0.99
DCLRE1AQ6PJP8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 PKD1P6-201ENST00000343738 4769 ntBASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 CD177P1-201ENST00000606252 935 ntBASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 AC073195.1-201ENST00000607241 877 ntBASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DCLRE1AQ6PJP8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DCLRE1AQ6PJP8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DCLRE1AQ6PJP8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DCLRE1AQ6PJP8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DCLRE1AQ6PJP8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DCLRE1AQ6PJP8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.24■□□□□ 0.99
DCLRE1AQ6PJP8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DCLRE1AQ6PJP8 AL353708.3-201ENST00000610272 989 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms