Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 AP002469.2-201ENST00000531724 424 ntBASIC19.45■□□□□ 0.7
RIF1Q5UIP0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIF1Q5UIP0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 PMS2P1-201ENST00000431037 1228 ntBASIC19.44■□□□□ 0.7
RIF1Q5UIP0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 RCC2P6-201ENST00000526625 1557 ntBASIC19.44■□□□□ 0.7
RIF1Q5UIP0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIF1Q5UIP0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 TSPY17P-201ENST00000450329 467 ntBASIC19.43■□□□□ 0.7
RIF1Q5UIP0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 AIRN-201ENST00000601203 4374 ntBASIC19.43■□□□□ 0.7
RIF1Q5UIP0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 KRT18P38-201ENST00000449496 1282 ntBASIC19.43■□□□□ 0.7
RIF1Q5UIP0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIF1Q5UIP0 AL732292.2-201ENST00000609649 430 ntBASIC19.43■□□□□ 0.7
RIF1Q5UIP0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 FAM220CP-201ENST00000395253 831 ntBASIC19.42■□□□□ 0.7
RIF1Q5UIP0 MFAP1P1-201ENST00000442257 1255 ntBASIC19.42■□□□□ 0.7
RIF1Q5UIP0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 AC106795.1-205ENST00000512851 1056 ntBASIC19.42■□□□□ 0.7
RIF1Q5UIP0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 AL355385.1-201ENST00000606123 409 ntBASIC19.42■□□□□ 0.7
RIF1Q5UIP0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RIF1Q5UIP0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIF1Q5UIP0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RIF1Q5UIP0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIF1Q5UIP0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.41■□□□□ 0.7
RIF1Q5UIP0 AC008040.2-201ENST00000461049 708 ntBASIC19.41■□□□□ 0.7
RIF1Q5UIP0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.41■□□□□ 0.7
RIF1Q5UIP0 PRELID1P1-202ENST00000567272 903 ntBASIC19.41■□□□□ 0.7
RIF1Q5UIP0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.41■□□□□ 0.7
RIF1Q5UIP0 PTBP1P-201ENST00000554374 1601 ntBASIC19.41■□□□□ 0.7
RIF1Q5UIP0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIF1Q5UIP0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RIF1Q5UIP0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RIF1Q5UIP0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RIF1Q5UIP0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms