Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.22■■□□□ 1.63
RC3H1Q5TC82 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.22■■□□□ 1.63
RC3H1Q5TC82 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 FDX2-206ENST00000492239 773 ntTSL 2 BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 AL358472.4-201ENST00000633140 710 ntBASIC25.21■■□□□ 1.63
RC3H1Q5TC82 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H1Q5TC82 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.2■■□□□ 1.63
RC3H1Q5TC82 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 USF2-205ENST00000594064 1179 ntTSL 2 BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H1Q5TC82 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RC3H1Q5TC82 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RC3H1Q5TC82 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.19■■□□□ 1.62
RC3H1Q5TC82 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RC3H1Q5TC82 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RC3H1Q5TC82 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
RC3H1Q5TC82 UPK3BP1-201ENST00000428678 509 ntBASIC25.19■■□□□ 1.62
RC3H1Q5TC82 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
RC3H1Q5TC82 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
RC3H1Q5TC82 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RC3H1Q5TC82 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.19■■□□□ 1.62
RC3H1Q5TC82 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RC3H1Q5TC82 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RC3H1Q5TC82 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RC3H1Q5TC82 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
RC3H1Q5TC82 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
RC3H1Q5TC82 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC25.18■■□□□ 1.62
RC3H1Q5TC82 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RC3H1Q5TC82 AC008040.2-201ENST00000461049 708 ntBASIC25.18■■□□□ 1.62
RC3H1Q5TC82 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC25.18■■□□□ 1.62
RC3H1Q5TC82 SLC25A1P4-201ENST00000567977 778 ntBASIC25.18■■□□□ 1.62
RC3H1Q5TC82 RCC2P6-201ENST00000526625 1557 ntBASIC25.18■■□□□ 1.62
RC3H1Q5TC82 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 AC018553.1-201ENST00000616682 1458 ntBASIC25.17■■□□□ 1.62
RC3H1Q5TC82 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.17■■□□□ 1.62
RC3H1Q5TC82 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 AC096733.2-201ENST00000609937 1394 ntBASIC25.17■■□□□ 1.62
RC3H1Q5TC82 AC005229.4-201ENST00000610085 2198 ntBASIC25.17■■□□□ 1.62
RC3H1Q5TC82 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RC3H1Q5TC82 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 RNF152P1-201ENST00000397754 604 ntBASIC25.16■■□□□ 1.62
RC3H1Q5TC82 AL031133.1-201ENST00000406807 723 ntBASIC25.16■■□□□ 1.62
RC3H1Q5TC82 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.16■■□□□ 1.62
RC3H1Q5TC82 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RC3H1Q5TC82 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC25.15■■□□□ 1.62
RC3H1Q5TC82 AC116562.4-202ENST00000641738 218 ntBASIC25.15■■□□□ 1.62
RC3H1Q5TC82 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
RC3H1Q5TC82 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms