Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 AC092720.2-201ENST00000602388 1665 ntBASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNFT1Q5M7Z0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.96■□□□□ 0.46
RNFT1Q5M7Z0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNFT1Q5M7Z0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 AP002982.1-201ENST00000492365 877 ntBASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.95■□□□□ 0.46
RNFT1Q5M7Z0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 FAM210CP-201ENST00000445714 574 ntBASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 AC012306.2-201ENST00000609350 630 ntBASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNFT1Q5M7Z0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 AC007375.3-201ENST00000600936 2314 ntBASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 SMG8-203ENST00000578922 2178 ntBASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNFT1Q5M7Z0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 NUDT16P1-203ENST00000513809 620 ntBASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 KRT18P21-201ENST00000515767 1272 ntBASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 REXO1L10P-201ENST00000615707 1290 ntBASIC17.92■□□□□ 0.46
RNFT1Q5M7Z0 AC097493.4-201ENST00000641197 219 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms