Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK3Q00526 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK3Q00526 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 PHGDH-210ENST00000641115 1638 ntBASIC19.6■□□□□ 0.73
CDK3Q00526 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK3Q00526 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK3Q00526 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CDK3Q00526 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDK3Q00526 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK3Q00526 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK3Q00526 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK3Q00526 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK3Q00526 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDK3Q00526 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK3Q00526 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.59■□□□□ 0.73
CDK3Q00526 Z99916.2-201ENST00000604037 246 ntBASIC19.59■□□□□ 0.73
CDK3Q00526 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.59■□□□□ 0.73
CDK3Q00526 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK3Q00526 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CDK3Q00526 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDK3Q00526 AC018553.1-201ENST00000616682 1458 ntBASIC19.59■□□□□ 0.73
CDK3Q00526 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK3Q00526 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK3Q00526 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CDK3Q00526 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CDK3Q00526 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.58■□□□□ 0.73
CDK3Q00526 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.58■□□□□ 0.73
CDK3Q00526 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDK3Q00526 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK3Q00526 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CDK3Q00526 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CDK3Q00526 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK3Q00526 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.58■□□□□ 0.72
CDK3Q00526 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK3Q00526 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDK3Q00526 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.58■□□□□ 0.72
CDK3Q00526 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDK3Q00526 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.58■□□□□ 0.72
CDK3Q00526 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CDK3Q00526 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK3Q00526 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.58■□□□□ 0.72
CDK3Q00526 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CDK3Q00526 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDK3Q00526 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK3Q00526 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CDK3Q00526 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK3Q00526 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CDK3Q00526 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK3Q00526 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK3Q00526 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK3Q00526 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDK3Q00526 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.57■□□□□ 0.72
CDK3Q00526 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK3Q00526 KRT16P5-201ENST00000455284 522 ntBASIC19.57■□□□□ 0.72
CDK3Q00526 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK3Q00526 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK3Q00526 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK3Q00526 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK3Q00526 AC092667.1-201ENST00000434301 2586 ntBASIC19.57■□□□□ 0.72
CDK3Q00526 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK3Q00526 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDK3Q00526 AL162377.1-201ENST00000618844 1793 ntBASIC19.57■□□□□ 0.72
CDK3Q00526 TFP1-202ENST00000475455 1573 ntBASIC19.57■□□□□ 0.72
CDK3Q00526 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK3Q00526 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.56■□□□□ 0.72
CDK3Q00526 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.56■□□□□ 0.72
CDK3Q00526 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDK3Q00526 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK3Q00526 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK3Q00526 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK3Q00526 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK3Q00526 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK3Q00526 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDK3Q00526 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK3Q00526 AC012618.2-201ENST00000428058 849 ntBASIC19.56■□□□□ 0.72
CDK3Q00526 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDK3Q00526 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK3Q00526 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.56■□□□□ 0.72
CDK3Q00526 RARRES2P10-201ENST00000564312 460 ntBASIC19.56■□□□□ 0.72
CDK3Q00526 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms