Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
PRAMEP78395 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEP78395 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEP78395 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEP78395 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEP78395 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.02■□□□□ 0.8
PRAMEP78395 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.02■□□□□ 0.8
PRAMEP78395 AC083906.2-201ENST00000511578 360 ntBASIC20.02■□□□□ 0.8
PRAMEP78395 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEP78395 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEP78395 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEP78395 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEP78395 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEP78395 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEP78395 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
PRAMEP78395 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.02■□□□□ 0.79
PRAMEP78395 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEP78395 KRT16P6-202ENST00000425692 1426 ntBASIC20.02■□□□□ 0.79
PRAMEP78395 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEP78395 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEP78395 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEP78395 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PRAMEP78395 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
PRAMEP78395 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEP78395 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 HLA-G-202ENST00000376815 851 ntBASIC20.01■□□□□ 0.79
PRAMEP78395 HLA-G-203ENST00000376818 1127 ntBASIC20.01■□□□□ 0.79
PRAMEP78395 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEP78395 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PRAMEP78395 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PRAMEP78395 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.01■□□□□ 0.79
PRAMEP78395 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.01■□□□□ 0.79
PRAMEP78395 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PRAMEP78395 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEP78395 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEP78395 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.01■□□□□ 0.79
PRAMEP78395 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.01■□□□□ 0.79
PRAMEP78395 BID-204ENST00000399767 2129 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEP78395 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEP78395 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEP78395 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEP78395 LBX2-AS1-202ENST00000603175 2083 ntBASIC20■□□□□ 0.79
PRAMEP78395 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PRAMEP78395 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PRAMEP78395 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20■□□□□ 0.79
PRAMEP78395 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20■□□□□ 0.79
PRAMEP78395 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEP78395 PPP1R14BP3-201ENST00000509033 445 ntBASIC20■□□□□ 0.79
PRAMEP78395 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20■□□□□ 0.79
PRAMEP78395 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEP78395 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEP78395 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PRAMEP78395 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEP78395 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEP78395 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PRAMEP78395 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PRAMEP78395 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEP78395 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 SLC29A4P1-201ENST00000398760 971 ntBASIC19.99■□□□□ 0.79
PRAMEP78395 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PRAMEP78395 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEP78395 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.99■□□□□ 0.79
PRAMEP78395 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PRAMEP78395 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.99■□□□□ 0.79
PRAMEP78395 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEP78395 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEP78395 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.98■□□□□ 0.79
PRAMEP78395 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PRAMEP78395 MIPEPP3-201ENST00000412105 444 ntBASIC19.98■□□□□ 0.79
PRAMEP78395 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.98■□□□□ 0.79
PRAMEP78395 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEP78395 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEP78395 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PRAMEP78395 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.98■□□□□ 0.79
PRAMEP78395 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEP78395 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEP78395 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms