Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.96■□□□□ 0.63
GABREP78334 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.96■□□□□ 0.63
GABREP78334 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.96■□□□□ 0.63
GABREP78334 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.95■□□□□ 0.62
GABREP78334 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.95■□□□□ 0.62
GABREP78334 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.95■□□□□ 0.62
GABREP78334 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 LIN28AP1-201ENST00000429574 405 ntBASIC18.95■□□□□ 0.62
GABREP78334 AC104076.2-201ENST00000448912 469 ntBASIC18.95■□□□□ 0.62
GABREP78334 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.95■□□□□ 0.62
GABREP78334 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
GABREP78334 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
GABREP78334 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
GABREP78334 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
GABREP78334 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABREP78334 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.94■□□□□ 0.62
GABREP78334 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GABREP78334 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.94■□□□□ 0.62
GABREP78334 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
GABREP78334 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GABREP78334 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GABREP78334 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GABREP78334 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
GABREP78334 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.94■□□□□ 0.62
GABREP78334 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.94■□□□□ 0.62
GABREP78334 ATP5G1P1-201ENST00000448724 379 ntBASIC18.94■□□□□ 0.62
GABREP78334 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.94■□□□□ 0.62
GABREP78334 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GABREP78334 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.94■□□□□ 0.62
GABREP78334 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.94■□□□□ 0.62
GABREP78334 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.94■□□□□ 0.62
GABREP78334 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.94■□□□□ 0.62
GABREP78334 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GABREP78334 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GABREP78334 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GABREP78334 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GABREP78334 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GABREP78334 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GABREP78334 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GABREP78334 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.93■□□□□ 0.62
GABREP78334 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GABREP78334 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.93■□□□□ 0.62
GABREP78334 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GABREP78334 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GABREP78334 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.93■□□□□ 0.62
GABREP78334 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.93■□□□□ 0.62
GABREP78334 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.93■□□□□ 0.62
GABREP78334 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.93■□□□□ 0.62
GABREP78334 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.93■□□□□ 0.62
GABREP78334 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
GABREP78334 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GABREP78334 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
GABREP78334 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.93■□□□□ 0.62
GABREP78334 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
GABREP78334 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GABREP78334 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.93■□□□□ 0.62
GABREP78334 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GABREP78334 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
GABREP78334 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABREP78334 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABREP78334 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.92■□□□□ 0.62
GABREP78334 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABREP78334 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.92■□□□□ 0.62
GABREP78334 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABREP78334 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.92■□□□□ 0.62
GABREP78334 AC010203.1-204ENST00000548782 407 ntBASIC18.92■□□□□ 0.62
GABREP78334 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.92■□□□□ 0.62
GABREP78334 AL031985.4-201ENST00000642138 673 ntBASIC18.92■□□□□ 0.62
GABREP78334 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABREP78334 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GABREP78334 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABREP78334 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABREP78334 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABREP78334 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABREP78334 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABREP78334 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABREP78334 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABREP78334 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABREP78334 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.91■□□□□ 0.62
GABREP78334 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABREP78334 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABREP78334 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.91■□□□□ 0.62
GABREP78334 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.91■□□□□ 0.62
GABREP78334 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
GABREP78334 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABREP78334 C2orf69P3-201ENST00000565542 1120 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms