Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSMD4P55036 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSMD4P55036 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSMD4P55036 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSMD4P55036 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSMD4P55036 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSMD4P55036 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSMD4P55036 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.51■□□□□ 0.55
PSMD4P55036 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.51■□□□□ 0.55
PSMD4P55036 AL390719.1-204ENST00000412397 1219 ntBASIC18.51■□□□□ 0.55
PSMD4P55036 AC069152.1-201ENST00000438030 544 ntBASIC18.51■□□□□ 0.55
PSMD4P55036 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.51■□□□□ 0.55
PSMD4P55036 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.51■□□□□ 0.55
PSMD4P55036 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.51■□□□□ 0.55
PSMD4P55036 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.51■□□□□ 0.55
PSMD4P55036 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PSMD4P55036 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.51■□□□□ 0.55
PSMD4P55036 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.5■□□□□ 0.55
PSMD4P55036 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.5■□□□□ 0.55
PSMD4P55036 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 KRT16P6-202ENST00000425692 1426 ntBASIC18.5■□□□□ 0.55
PSMD4P55036 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PSMD4P55036 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PSMD4P55036 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.5■□□□□ 0.55
PSMD4P55036 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PSMD4P55036 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 BX119927.1-201ENST00000636596 1552 ntBASIC18.5■□□□□ 0.55
PSMD4P55036 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PSMD4P55036 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PSMD4P55036 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
PSMD4P55036 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
PSMD4P55036 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PSMD4P55036 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 AL355802.2-201ENST00000402069 882 ntBASIC18.49■□□□□ 0.55
PSMD4P55036 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.49■□□□□ 0.55
PSMD4P55036 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.49■□□□□ 0.55
PSMD4P55036 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.49■□□□□ 0.55
PSMD4P55036 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PSMD4P55036 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 PTBP1P-201ENST00000554374 1601 ntBASIC18.49■□□□□ 0.55
PSMD4P55036 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.49■□□□□ 0.55
PSMD4P55036 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSMD4P55036 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PSMD4P55036 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PSMD4P55036 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PSMD4P55036 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PSMD4P55036 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PSMD4P55036 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PSMD4P55036 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PSMD4P55036 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
PSMD4P55036 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.48■□□□□ 0.55
PSMD4P55036 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.48■□□□□ 0.55
PSMD4P55036 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PSMD4P55036 MYC-209ENST00000641252 345 ntBASIC18.48■□□□□ 0.55
PSMD4P55036 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PSMD4P55036 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.48■□□□□ 0.55
PSMD4P55036 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PSMD4P55036 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PSMD4P55036 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PSMD4P55036 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PSMD4P55036 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PSMD4P55036 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.48■□□□□ 0.55
PSMD4P55036 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PSMD4P55036 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PSMD4P55036 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PSMD4P55036 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PSMD4P55036 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PSMD4P55036 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PSMD4P55036 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PSMD4P55036 TCF3P1-201ENST00000423021 1937 ntBASIC18.47■□□□□ 0.55
PSMD4P55036 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PSMD4P55036 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PSMD4P55036 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PSMD4P55036 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PSMD4P55036 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.47■□□□□ 0.55
PSMD4P55036 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.47■□□□□ 0.55
PSMD4P55036 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PSMD4P55036 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PSMD4P55036 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms