Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.4■□□□□ 0.38
HCFC1P51610 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.4■□□□□ 0.38
HCFC1P51610 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.4■□□□□ 0.38
HCFC1P51610 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.4■□□□□ 0.38
HCFC1P51610 AL031985.4-201ENST00000642138 673 ntBASIC17.4■□□□□ 0.38
HCFC1P51610 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HCFC1P51610 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 AC244015.2-201ENST00000616358 1861 ntBASIC17.4■□□□□ 0.38
HCFC1P51610 AF106564.1-201ENST00000607058 2553 ntBASIC17.4■□□□□ 0.38
HCFC1P51610 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HCFC1P51610 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.4■□□□□ 0.38
HCFC1P51610 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 ARMC10P1-201ENST00000313754 855 ntBASIC17.4■□□□□ 0.38
HCFC1P51610 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
HCFC1P51610 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.4■□□□□ 0.38
HCFC1P51610 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC1P51610 FITM1-202ENST00000559294 800 ntBASIC17.4■□□□□ 0.38
HCFC1P51610 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.4■□□□□ 0.38
HCFC1P51610 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.39■□□□□ 0.38
HCFC1P51610 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HCFC1P51610 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC1P51610 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
HCFC1P51610 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.39■□□□□ 0.37
HCFC1P51610 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC1P51610 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC1P51610 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC1P51610 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC1P51610 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC1P51610 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC1P51610 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.39■□□□□ 0.37
HCFC1P51610 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC1P51610 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC1P51610 CR392000.1-201ENST00000624770 1228 ntBASIC17.39■□□□□ 0.37
HCFC1P51610 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HCFC1P51610 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HCFC1P51610 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC1P51610 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HCFC1P51610 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC1P51610 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.39■□□□□ 0.37
HCFC1P51610 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.39■□□□□ 0.37
HCFC1P51610 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.39■□□□□ 0.37
HCFC1P51610 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC1P51610 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC1P51610 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC1P51610 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.38■□□□□ 0.37
HCFC1P51610 DUX4L26-201ENST00000489078 1255 ntBASIC17.38■□□□□ 0.37
HCFC1P51610 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.38■□□□□ 0.37
HCFC1P51610 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC1P51610 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HCFC1P51610 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC1P51610 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HCFC1P51610 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.38■□□□□ 0.37
HCFC1P51610 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.38■□□□□ 0.37
HCFC1P51610 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC1P51610 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC1P51610 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC1P51610 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC1P51610 YBX1P10-201ENST00000444752 975 ntBASIC17.38■□□□□ 0.37
HCFC1P51610 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC1P51610 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.38■□□□□ 0.37
HCFC1P51610 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC1P51610 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC1P51610 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC1P51610 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC1P51610 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC1P51610 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC1P51610 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC1P51610 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HCFC1P51610 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC1P51610 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC1P51610 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.37■□□□□ 0.37
HCFC1P51610 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HCFC1P51610 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
HCFC1P51610 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.37■□□□□ 0.37
HCFC1P51610 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC1P51610 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HCFC1P51610 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.37■□□□□ 0.37
HCFC1P51610 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC1P51610 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.37■□□□□ 0.37
HCFC1P51610 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.37■□□□□ 0.37
HCFC1P51610 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC1P51610 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.37■□□□□ 0.37
HCFC1P51610 NAPSB-206ENST00000562112 1266 ntBASIC17.37■□□□□ 0.37
HCFC1P51610 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HCFC1P51610 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.37■□□□□ 0.37
HCFC1P51610 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC1P51610 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.37■□□□□ 0.37
HCFC1P51610 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.37■□□□□ 0.37
HCFC1P51610 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC1P51610 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC1P51610 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms