Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAB28P51157 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAB28P51157 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
RAB28P51157 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB28P51157 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB28P51157 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 PHGDH-210ENST00000641115 1638 ntBASIC19.23■□□□□ 0.67
RAB28P51157 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RAB28P51157 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RAB28P51157 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.23■□□□□ 0.67
RAB28P51157 AC233263.1-201ENST00000578059 224 ntBASIC19.23■□□□□ 0.67
RAB28P51157 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RAB28P51157 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
RAB28P51157 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB28P51157 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB28P51157 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RAB28P51157 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB28P51157 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB28P51157 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RAB28P51157 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB28P51157 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB28P51157 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB28P51157 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB28P51157 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB28P51157 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB28P51157 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB28P51157 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RAB28P51157 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB28P51157 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB28P51157 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB28P51157 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB28P51157 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB28P51157 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB28P51157 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB28P51157 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB28P51157 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB28P51157 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.21■□□□□ 0.67
RAB28P51157 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB28P51157 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.21■□□□□ 0.67
RAB28P51157 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB28P51157 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.21■□□□□ 0.67
RAB28P51157 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB28P51157 MTDHP1-201ENST00000605323 784 ntBASIC19.21■□□□□ 0.67
RAB28P51157 AC116351.2-201ENST00000606540 1585 ntBASIC19.21■□□□□ 0.67
RAB28P51157 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RAB28P51157 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB28P51157 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB28P51157 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB28P51157 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB28P51157 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB28P51157 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB28P51157 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB28P51157 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB28P51157 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB28P51157 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB28P51157 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.2■□□□□ 0.66
RAB28P51157 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB28P51157 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.2■□□□□ 0.66
RAB28P51157 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.2■□□□□ 0.66
RAB28P51157 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB28P51157 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB28P51157 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB28P51157 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB28P51157 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB28P51157 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB28P51157 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB28P51157 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
RAB28P51157 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB28P51157 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAB28P51157 AL691432.2-201ENST00000607222 2038 ntBASIC19.19■□□□□ 0.66
RAB28P51157 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB28P51157 PRORSD1P-201ENST00000295112 541 ntBASIC19.19■□□□□ 0.66
RAB28P51157 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB28P51157 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms