Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BRCC3P46736 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.21■□□□□ 0.99
BRCC3P46736 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BRCC3P46736 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BRCC3P46736 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BRCC3P46736 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BRCC3P46736 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BRCC3P46736 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BRCC3P46736 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
BRCC3P46736 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.21■□□□□ 0.99
BRCC3P46736 MIR4785-201ENST00000585005 73 ntBASIC21.21■□□□□ 0.99
BRCC3P46736 AC073912.3-201ENST00000624414 853 ntBASIC21.21■□□□□ 0.99
BRCC3P46736 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
BRCC3P46736 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
BRCC3P46736 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BRCC3P46736 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
BRCC3P46736 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.21■□□□□ 0.99
BRCC3P46736 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.21■□□□□ 0.99
BRCC3P46736 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
BRCC3P46736 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BRCC3P46736 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BRCC3P46736 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
BRCC3P46736 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BRCC3P46736 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.2■□□□□ 0.98
BRCC3P46736 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.2■□□□□ 0.98
BRCC3P46736 FAM197Y1-201ENST00000421178 764 ntBASIC21.2■□□□□ 0.98
BRCC3P46736 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BRCC3P46736 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.2■□□□□ 0.98
BRCC3P46736 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.2■□□□□ 0.98
BRCC3P46736 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.2■□□□□ 0.98
BRCC3P46736 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BRCC3P46736 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.2■□□□□ 0.98
BRCC3P46736 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
BRCC3P46736 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.2■□□□□ 0.98
BRCC3P46736 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BRCC3P46736 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BRCC3P46736 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BRCC3P46736 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BRCC3P46736 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRCC3P46736 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRCC3P46736 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
BRCC3P46736 PKD1P6-201ENST00000343738 4769 ntBASIC21.19■□□□□ 0.98
BRCC3P46736 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.19■□□□□ 0.98
BRCC3P46736 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRCC3P46736 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRCC3P46736 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRCC3P46736 BX088651.1-201ENST00000540551 451 ntBASIC21.19■□□□□ 0.98
BRCC3P46736 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.19■□□□□ 0.98
BRCC3P46736 AL355075.4-201ENST00000554988 638 ntBASIC21.19■□□□□ 0.98
BRCC3P46736 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.19■□□□□ 0.98
BRCC3P46736 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.19■□□□□ 0.98
BRCC3P46736 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRCC3P46736 CD177P1-201ENST00000606252 935 ntBASIC21.19■□□□□ 0.98
BRCC3P46736 REXO1L12P-201ENST00000622156 912 ntBASIC21.19■□□□□ 0.98
BRCC3P46736 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRCC3P46736 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
BRCC3P46736 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRCC3P46736 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
BRCC3P46736 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRCC3P46736 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRCC3P46736 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRCC3P46736 AC116351.2-201ENST00000606540 1585 ntBASIC21.19■□□□□ 0.98
BRCC3P46736 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.18■□□□□ 0.98
BRCC3P46736 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
BRCC3P46736 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
BRCC3P46736 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRCC3P46736 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
BRCC3P46736 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRCC3P46736 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
BRCC3P46736 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRCC3P46736 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.18■□□□□ 0.98
BRCC3P46736 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRCC3P46736 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRCC3P46736 AC026471.5-201ENST00000615068 467 ntBASIC21.18■□□□□ 0.98
BRCC3P46736 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
BRCC3P46736 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.18■□□□□ 0.98
BRCC3P46736 AC018553.1-201ENST00000616682 1458 ntBASIC21.18■□□□□ 0.98
BRCC3P46736 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
BRCC3P46736 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.18■□□□□ 0.98
BRCC3P46736 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.18■□□□□ 0.98
BRCC3P46736 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRCC3P46736 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.17■□□□□ 0.98
BRCC3P46736 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRCC3P46736 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
BRCC3P46736 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.17■□□□□ 0.98
BRCC3P46736 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.17■□□□□ 0.98
BRCC3P46736 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRCC3P46736 TFP1-202ENST00000475455 1573 ntBASIC21.17■□□□□ 0.98
BRCC3P46736 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.17■□□□□ 0.98
BRCC3P46736 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRCC3P46736 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRCC3P46736 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
BRCC3P46736 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRCC3P46736 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRCC3P46736 AC073314.1-201ENST00000568729 2216 ntBASIC21.16■□□□□ 0.98
BRCC3P46736 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRCC3P46736 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
BRCC3P46736 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
BRCC3P46736 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRCC3P46736 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms