Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC008550.1-201ENST00000511500 884 ntBASIC20.46■□□□□ 0.87
SLC6A4P31645 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC6A4P31645 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SLC6A4P31645 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SLC6A4P31645 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A4P31645 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A4P31645 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
SLC6A4P31645 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A4P31645 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SLC6A4P31645 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.45■□□□□ 0.87
SLC6A4P31645 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SLC6A4P31645 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A4P31645 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A4P31645 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A4P31645 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A4P31645 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC6A4P31645 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SLC6A4P31645 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SLC6A4P31645 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A4P31645 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC6A4P31645 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A4P31645 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC6A4P31645 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC6A4P31645 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
SLC6A4P31645 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A4P31645 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.45■□□□□ 0.86
SLC6A4P31645 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A4P31645 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC6A4P31645 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC6A4P31645 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A4P31645 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC6A4P31645 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A4P31645 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SLC6A4P31645 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A4P31645 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SLC6A4P31645 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A4P31645 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A4P31645 AC116351.2-201ENST00000606540 1585 ntBASIC20.44■□□□□ 0.86
SLC6A4P31645 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A4P31645 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A4P31645 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC6A4P31645 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A4P31645 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A4P31645 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SLC6A4P31645 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SLC6A4P31645 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC6A4P31645 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC6A4P31645 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.44■□□□□ 0.86
SLC6A4P31645 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC6A4P31645 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
SLC6A4P31645 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC6A4P31645 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC6A4P31645 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SLC6A4P31645 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 NBPF21P-201ENST00000425093 1451 ntBASIC20.43■□□□□ 0.86
SLC6A4P31645 AC018553.1-201ENST00000616682 1458 ntBASIC20.43■□□□□ 0.86
SLC6A4P31645 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC6A4P31645 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC6A4P31645 PHGDH-210ENST00000641115 1638 ntBASIC20.43■□□□□ 0.86
SLC6A4P31645 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC6A4P31645 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC6A4P31645 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 PKD1P6-201ENST00000343738 4769 ntBASIC20.43■□□□□ 0.86
SLC6A4P31645 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC6A4P31645 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC6A4P31645 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A4P31645 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC6A4P31645 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC6A4P31645 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SLC6A4P31645 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SLC6A4P31645 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC6A4P31645 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SLC6A4P31645 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 RPS2P4-201ENST00000476944 856 ntBASIC20.42■□□□□ 0.86
SLC6A4P31645 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
SLC6A4P31645 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC6A4P31645 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC6A4P31645 Z99916.2-201ENST00000604037 246 ntBASIC20.42■□□□□ 0.86
SLC6A4P31645 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms