Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCLP18206 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VCLP18206 AC092720.2-201ENST00000602388 1665 ntBASIC19.96■□□□□ 0.79
VCLP18206 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
VCLP18206 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCLP18206 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCLP18206 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
VCLP18206 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCLP18206 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCLP18206 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCLP18206 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCLP18206 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCLP18206 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.95■□□□□ 0.78
VCLP18206 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.95■□□□□ 0.78
VCLP18206 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.95■□□□□ 0.78
VCLP18206 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCLP18206 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
VCLP18206 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCLP18206 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCLP18206 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.95■□□□□ 0.78
VCLP18206 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCLP18206 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.94■□□□□ 0.78
VCLP18206 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VCLP18206 KRT8P36-201ENST00000489121 1440 ntBASIC19.94■□□□□ 0.78
VCLP18206 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.94■□□□□ 0.78
VCLP18206 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
VCLP18206 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VCLP18206 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.94■□□□□ 0.78
VCLP18206 RNA5SP413-201ENST00000516373 109 ntBASIC19.94■□□□□ 0.78
VCLP18206 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.94■□□□□ 0.78
VCLP18206 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VCLP18206 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.94■□□□□ 0.78
VCLP18206 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.94■□□□□ 0.78
VCLP18206 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VCLP18206 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCLP18206 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VCLP18206 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VCLP18206 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.93■□□□□ 0.78
VCLP18206 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
VCLP18206 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.93■□□□□ 0.78
VCLP18206 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
VCLP18206 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.93■□□□□ 0.78
VCLP18206 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.93■□□□□ 0.78
VCLP18206 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.93■□□□□ 0.78
VCLP18206 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCLP18206 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
VCLP18206 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
VCLP18206 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VCLP18206 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VCLP18206 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCLP18206 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
VCLP18206 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.92■□□□□ 0.78
VCLP18206 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCLP18206 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.92■□□□□ 0.78
VCLP18206 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.92■□□□□ 0.78
VCLP18206 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.92■□□□□ 0.78
VCLP18206 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VCLP18206 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.92■□□□□ 0.78
VCLP18206 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.92■□□□□ 0.78
VCLP18206 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
VCLP18206 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.92■□□□□ 0.78
VCLP18206 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.92■□□□□ 0.78
VCLP18206 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCLP18206 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VCLP18206 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VCLP18206 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VCLP18206 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCLP18206 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCLP18206 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.92■□□□□ 0.78
VCLP18206 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCLP18206 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VCLP18206 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VCLP18206 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms