Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL6A2P12110 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.64■□□□□ 0.73
COL6A2P12110 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.64■□□□□ 0.73
COL6A2P12110 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL6A2P12110 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL6A2P12110 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
COL6A2P12110 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
COL6A2P12110 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 Z82202.1-201ENST00000623446 1880 ntBASIC19.63■□□□□ 0.73
COL6A2P12110 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.63■□□□□ 0.73
COL6A2P12110 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.63■□□□□ 0.73
COL6A2P12110 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.63■□□□□ 0.73
COL6A2P12110 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
COL6A2P12110 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
COL6A2P12110 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL6A2P12110 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
COL6A2P12110 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL6A2P12110 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL6A2P12110 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL6A2P12110 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
COL6A2P12110 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.63■□□□□ 0.73
COL6A2P12110 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.62■□□□□ 0.73
COL6A2P12110 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL6A2P12110 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL6A2P12110 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COL6A2P12110 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL6A2P12110 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.62■□□□□ 0.73
COL6A2P12110 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL6A2P12110 CYP2T3P-201ENST00000601990 817 ntBASIC19.62■□□□□ 0.73
COL6A2P12110 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COL6A2P12110 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COL6A2P12110 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.62■□□□□ 0.73
COL6A2P12110 AC087289.5-201ENST00000586076 3175 ntBASIC19.62■□□□□ 0.73
COL6A2P12110 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL6A2P12110 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COL6A2P12110 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
COL6A2P12110 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
COL6A2P12110 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A2P12110 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A2P12110 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A2P12110 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.61■□□□□ 0.73
COL6A2P12110 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A2P12110 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A2P12110 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COL6A2P12110 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.61■□□□□ 0.73
COL6A2P12110 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.61■□□□□ 0.73
COL6A2P12110 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.61■□□□□ 0.73
COL6A2P12110 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.61■□□□□ 0.73
COL6A2P12110 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A2P12110 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A2P12110 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A2P12110 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A2P12110 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL6A2P12110 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL6A2P12110 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A2P12110 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A2P12110 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL6A2P12110 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.6■□□□□ 0.73
COL6A2P12110 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL6A2P12110 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A2P12110 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.6■□□□□ 0.73
COL6A2P12110 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A2P12110 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL6A2P12110 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A2P12110 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A2P12110 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.6■□□□□ 0.73
COL6A2P12110 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.6■□□□□ 0.73
COL6A2P12110 AC023632.3-201ENST00000521633 145 ntBASIC19.6■□□□□ 0.73
COL6A2P12110 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.6■□□□□ 0.73
COL6A2P12110 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL6A2P12110 AC069236.1-201ENST00000604339 616 ntBASIC19.6■□□□□ 0.73
COL6A2P12110 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms