Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FREM3P0C091 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.1■□□□□ 0.49
FREM3P0C091 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.1■□□□□ 0.49
FREM3P0C091 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
FREM3P0C091 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FREM3P0C091 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.1■□□□□ 0.49
FREM3P0C091 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FREM3P0C091 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.1■□□□□ 0.49
FREM3P0C091 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.1■□□□□ 0.49
FREM3P0C091 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FREM3P0C091 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FREM3P0C091 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FREM3P0C091 UBE2SP1-201ENST00000450587 669 ntBASIC18.1■□□□□ 0.49
FREM3P0C091 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
FREM3P0C091 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.1■□□□□ 0.49
FREM3P0C091 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
FREM3P0C091 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
FREM3P0C091 AL023875.1-201ENST00000640777 796 ntBASIC18.1■□□□□ 0.49
FREM3P0C091 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FREM3P0C091 AC239809.2-201ENST00000415381 517 ntBASIC18.09■□□□□ 0.49
FREM3P0C091 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.09■□□□□ 0.49
FREM3P0C091 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.09■□□□□ 0.49
FREM3P0C091 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
FREM3P0C091 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.09■□□□□ 0.49
FREM3P0C091 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.09■□□□□ 0.49
FREM3P0C091 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FREM3P0C091 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.09■□□□□ 0.49
FREM3P0C091 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FREM3P0C091 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
FREM3P0C091 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FREM3P0C091 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FREM3P0C091 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FREM3P0C091 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FREM3P0C091 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.09■□□□□ 0.49
FREM3P0C091 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FREM3P0C091 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FREM3P0C091 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
FREM3P0C091 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FREM3P0C091 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
FREM3P0C091 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FREM3P0C091 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
FREM3P0C091 AFG3L1P-217ENST00000557444 2447 ntBASIC18.08■□□□□ 0.49
FREM3P0C091 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
FREM3P0C091 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FREM3P0C091 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.08■□□□□ 0.49
FREM3P0C091 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.08■□□□□ 0.49
FREM3P0C091 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FREM3P0C091 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FREM3P0C091 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FREM3P0C091 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
FREM3P0C091 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FREM3P0C091 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.08■□□□□ 0.48
FREM3P0C091 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FREM3P0C091 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.08■□□□□ 0.48
FREM3P0C091 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FREM3P0C091 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
FREM3P0C091 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FREM3P0C091 AL355075.4-201ENST00000554988 638 ntBASIC18.08■□□□□ 0.48
FREM3P0C091 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FREM3P0C091 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FREM3P0C091 DPP3P2-201ENST00000416030 1696 ntBASIC18.08■□□□□ 0.48
FREM3P0C091 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FREM3P0C091 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.08■□□□□ 0.48
FREM3P0C091 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.08■□□□□ 0.48
FREM3P0C091 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FREM3P0C091 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.07■□□□□ 0.48
FREM3P0C091 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.07■□□□□ 0.48
FREM3P0C091 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
FREM3P0C091 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FREM3P0C091 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.07■□□□□ 0.48
FREM3P0C091 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FREM3P0C091 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FREM3P0C091 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.07■□□□□ 0.48
FREM3P0C091 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.07■□□□□ 0.48
FREM3P0C091 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
FREM3P0C091 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FREM3P0C091 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FREM3P0C091 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FREM3P0C091 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.07■□□□□ 0.48
FREM3P0C091 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.07■□□□□ 0.48
FREM3P0C091 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FREM3P0C091 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FREM3P0C091 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
FREM3P0C091 KRASP1-201ENST00000407852 552 ntBASIC18.07■□□□□ 0.48
FREM3P0C091 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FREM3P0C091 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FREM3P0C091 AL691432.2-201ENST00000607222 2038 ntBASIC18.07■□□□□ 0.48
FREM3P0C091 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
FREM3P0C091 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
FREM3P0C091 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
FREM3P0C091 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
FREM3P0C091 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
FREM3P0C091 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FREM3P0C091 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.06■□□□□ 0.48
FREM3P0C091 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.06■□□□□ 0.48
FREM3P0C091 NUDT16P1-203ENST00000513809 620 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms