Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RHOP08100 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RHOP08100 NAPSB-206ENST00000562112 1266 ntBASIC20.69■□□□□ 0.9
RHOP08100 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.69■□□□□ 0.9
RHOP08100 AL445228.2-201ENST00000605589 952 ntBASIC20.69■□□□□ 0.9
RHOP08100 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RHOP08100 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHOP08100 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RHOP08100 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RHOP08100 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.69■□□□□ 0.9
RHOP08100 AC116351.2-201ENST00000606540 1585 ntBASIC20.68■□□□□ 0.9
RHOP08100 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHOP08100 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHOP08100 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.68■□□□□ 0.9
RHOP08100 AC005521.1-201ENST00000393351 872 ntBASIC20.68■□□□□ 0.9
RHOP08100 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.68■□□□□ 0.9
RHOP08100 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RHOP08100 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.68■□□□□ 0.9
RHOP08100 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RHOP08100 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.68■□□□□ 0.9
RHOP08100 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHOP08100 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.68■□□□□ 0.9
RHOP08100 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.67■□□□□ 0.9
RHOP08100 AC007225.1-201ENST00000566331 1836 ntBASIC20.67■□□□□ 0.9
RHOP08100 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 AC010947.1-201ENST00000623454 693 ntBASIC20.67■□□□□ 0.9
RHOP08100 AL031985.4-201ENST00000642138 673 ntBASIC20.67■□□□□ 0.9
RHOP08100 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.67■□□□□ 0.9
RHOP08100 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 KRT16P6-202ENST00000425692 1426 ntBASIC20.67■□□□□ 0.9
RHOP08100 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RHOP08100 TFP1-202ENST00000475455 1573 ntBASIC20.67■□□□□ 0.9
RHOP08100 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RHOP08100 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOP08100 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOP08100 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOP08100 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOP08100 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOP08100 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOP08100 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHOP08100 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.66■□□□□ 0.9
RHOP08100 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHOP08100 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHOP08100 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.66■□□□□ 0.9
RHOP08100 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.66■□□□□ 0.9
RHOP08100 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.66■□□□□ 0.9
RHOP08100 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RHOP08100 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOP08100 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.66■□□□□ 0.9
RHOP08100 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.66■□□□□ 0.9
RHOP08100 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RHOP08100 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
RHOP08100 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RHOP08100 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.65■□□□□ 0.9
RHOP08100 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOP08100 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.65■□□□□ 0.9
RHOP08100 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOP08100 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RHOP08100 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.65■□□□□ 0.9
RHOP08100 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RHOP08100 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOP08100 AC113347.1-201ENST00000413321 391 ntBASIC20.65■□□□□ 0.9
RHOP08100 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
RHOP08100 KRT18P35-201ENST00000510488 1269 ntBASIC20.65■□□□□ 0.9
RHOP08100 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.65■□□□□ 0.9
RHOP08100 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.65■□□□□ 0.9
RHOP08100 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.65■□□□□ 0.9
RHOP08100 AL445675.2-201ENST00000620291 557 ntBASIC20.65■□□□□ 0.9
RHOP08100 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RHOP08100 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOP08100 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOP08100 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOP08100 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
RHOP08100 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RHOP08100 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RHOP08100 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RHOP08100 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RHOP08100 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHOP08100 AC018553.1-201ENST00000616682 1458 ntBASIC20.64■□□□□ 0.89
RHOP08100 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.64■□□□□ 0.89
RHOP08100 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHOP08100 KRT18P22-201ENST00000402024 1347 ntBASIC20.64■□□□□ 0.89
RHOP08100 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RHOP08100 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.64■□□□□ 0.89
RHOP08100 AL049597.2-201ENST00000565575 961 ntBASIC20.64■□□□□ 0.89
RHOP08100 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.64■□□□□ 0.89
RHOP08100 AC079834.2-201ENST00000609776 1949 ntBASIC20.64■□□□□ 0.89
RHOP08100 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.64■□□□□ 0.89
RHOP08100 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHOP08100 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHOP08100 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms