Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 AC120498.10-201ENST00000621827 505 ntBASIC17.84■□□□□ 0.45
HLA-DPB1P04440 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 AL691432.2-201ENST00000607222 2038 ntBASIC17.84■□□□□ 0.45
HLA-DPB1P04440 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPB1P04440 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DPB1P04440 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPB1P04440 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
HLA-DPB1P04440 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPB1P04440 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPB1P04440 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.83■□□□□ 0.45
HLA-DPB1P04440 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DPB1P04440 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPB1P04440 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPB1P04440 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPB1P04440 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 AC137761.2-201ENST00000561729 223 ntBASIC17.82■□□□□ 0.44
HLA-DPB1P04440 AC145350.3-201ENST00000569033 163 ntBASIC17.82■□□□□ 0.44
HLA-DPB1P04440 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 Z82202.1-201ENST00000623446 1880 ntBASIC17.82■□□□□ 0.44
HLA-DPB1P04440 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DPB1P04440 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 TREX1-205ENST00000625293 1783 ntBASIC17.81■□□□□ 0.44
HLA-DPB1P04440 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 UBE2DNL-204ENST00000602536 740 ntBASIC17.81■□□□□ 0.44
HLA-DPB1P04440 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPB1P04440 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms