Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD74P04233 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.71■□□□□ 0.27
CD74P04233 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.71■□□□□ 0.27
CD74P04233 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD74P04233 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.71■□□□□ 0.27
CD74P04233 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CD74P04233 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CD74P04233 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.71■□□□□ 0.27
CD74P04233 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CD74P04233 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.71■□□□□ 0.27
CD74P04233 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD74P04233 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD74P04233 AC079140.4-201ENST00000507448 529 ntBASIC16.71■□□□□ 0.27
CD74P04233 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD74P04233 AL136162.1-201ENST00000607711 1078 ntBASIC16.71■□□□□ 0.27
CD74P04233 AC243732.1-201ENST00000612648 864 ntBASIC16.71■□□□□ 0.27
CD74P04233 AL355001.2-201ENST00000620617 1191 ntBASIC16.71■□□□□ 0.27
CD74P04233 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD74P04233 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CD74P04233 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CD74P04233 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.71■□□□□ 0.27
CD74P04233 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD74P04233 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD74P04233 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD74P04233 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD74P04233 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD74P04233 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CD74P04233 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.7■□□□□ 0.26
CD74P04233 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CD74P04233 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CD74P04233 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.7■□□□□ 0.26
CD74P04233 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CD74P04233 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.7■□□□□ 0.26
CD74P04233 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD74P04233 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CD74P04233 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.7■□□□□ 0.26
CD74P04233 AC135279.3-201ENST00000610945 1311 ntBASIC16.7■□□□□ 0.26
CD74P04233 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CD74P04233 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD74P04233 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CD74P04233 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CD74P04233 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.69■□□□□ 0.26
CD74P04233 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.69■□□□□ 0.26
CD74P04233 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.69■□□□□ 0.26
CD74P04233 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.69■□□□□ 0.26
CD74P04233 AL049812.1-201ENST00000432563 2267 ntBASIC16.69■□□□□ 0.26
CD74P04233 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CD74P04233 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CD74P04233 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.69■□□□□ 0.26
CD74P04233 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
CD74P04233 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CD74P04233 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD74P04233 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.68■□□□□ 0.26
CD74P04233 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CD74P04233 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.68■□□□□ 0.26
CD74P04233 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 SLC7A5P2-201ENST00000553010 536 ntBASIC16.68■□□□□ 0.26
CD74P04233 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.68■□□□□ 0.26
CD74P04233 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.68■□□□□ 0.26
CD74P04233 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CD74P04233 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms