Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBP04114 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
APOBP04114 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.51□□□□□ -0.41
APOBP04114 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.51□□□□□ -0.41
APOBP04114 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOBP04114 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.51□□□□□ -0.41
APOBP04114 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.51□□□□□ -0.41
APOBP04114 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBP04114 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
APOBP04114 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBP04114 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBP04114 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.51□□□□□ -0.41
APOBP04114 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.51□□□□□ -0.41
APOBP04114 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOBP04114 STAC-204ENST00000457375 1366 ntTSL 2 BASIC12.51□□□□□ -0.41
APOBP04114 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
APOBP04114 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBP04114 SLC25A1P2-201ENST00000430693 912 ntBASIC12.5□□□□□ -0.41
APOBP04114 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.5□□□□□ -0.41
APOBP04114 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBP04114 C2orf69P3-201ENST00000565542 1120 ntBASIC12.5□□□□□ -0.41
APOBP04114 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.5□□□□□ -0.41
APOBP04114 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.5□□□□□ -0.41
APOBP04114 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
APOBP04114 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 MFF-203ENST00000349901 1716 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBP04114 RCC2P6-201ENST00000526625 1557 ntBASIC12.5□□□□□ -0.41
APOBP04114 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
APOBP04114 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC12.5□□□□□ -0.41
APOBP04114 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
APOBP04114 AC092647.4-201ENST00000457211 535 ntBASIC12.5□□□□□ -0.41
APOBP04114 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
APOBP04114 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.5□□□□□ -0.41
APOBP04114 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBP04114 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBP04114 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.5□□□□□ -0.41
APOBP04114 AL023803.3-201ENST00000615559 522 ntBASIC12.5□□□□□ -0.41
APOBP04114 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBP04114 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
APOBP04114 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBP04114 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.5□□□□□ -0.41
APOBP04114 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 AL671277.2-201ENST00000458060 996 ntBASIC12.5□□□□□ -0.41
APOBP04114 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBP04114 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
APOBP04114 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBP04114 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBP04114 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBP04114 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBP04114 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 AC246785.2-201ENST00000432512 513 ntBASIC12.49□□□□□ -0.41
APOBP04114 DYM-203ENST00000442713 2147 ntTSL 2 BASIC12.49□□□□□ -0.41
APOBP04114 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.49□□□□□ -0.41
APOBP04114 MIR3180-1-201ENST00000580374 94 ntBASIC12.49□□□□□ -0.41
APOBP04114 MIR3180-3-201ENST00000584616 94 ntBASIC12.49□□□□□ -0.41
APOBP04114 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBP04114 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBP04114 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 YBX1P10-201ENST00000444752 975 ntBASIC12.49□□□□□ -0.41
APOBP04114 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
APOBP04114 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.49□□□□□ -0.41
APOBP04114 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.49□□□□□ -0.41
APOBP04114 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.49□□□□□ -0.41
APOBP04114 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOBP04114 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.49□□□□□ -0.41
APOBP04114 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBP04114 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
APOBP04114 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
APOBP04114 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
APOBP04114 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 AL390719.1-204ENST00000412397 1219 ntBASIC12.48□□□□□ -0.41
APOBP04114 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms