Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LGI1O95970 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LGI1O95970 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGI1O95970 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGI1O95970 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LGI1O95970 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGI1O95970 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.36■□□□□ 0.53
LGI1O95970 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LGI1O95970 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
LGI1O95970 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.36■□□□□ 0.53
LGI1O95970 AC069236.1-201ENST00000604339 616 ntBASIC18.36■□□□□ 0.53
LGI1O95970 AC080038.1-201ENST00000611274 1154 ntBASIC18.36■□□□□ 0.53
LGI1O95970 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LGI1O95970 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.36■□□□□ 0.53
LGI1O95970 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LGI1O95970 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
LGI1O95970 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGI1O95970 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGI1O95970 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGI1O95970 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGI1O95970 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LGI1O95970 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
LGI1O95970 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.35■□□□□ 0.53
LGI1O95970 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGI1O95970 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
LGI1O95970 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGI1O95970 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.35■□□□□ 0.53
LGI1O95970 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LGI1O95970 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LGI1O95970 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LGI1O95970 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.35■□□□□ 0.53
LGI1O95970 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LGI1O95970 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.35■□□□□ 0.53
LGI1O95970 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGI1O95970 CYP2T1P-201ENST00000432607 1285 ntBASIC18.35■□□□□ 0.53
LGI1O95970 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.35■□□□□ 0.53
LGI1O95970 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.35■□□□□ 0.53
LGI1O95970 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGI1O95970 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.35■□□□□ 0.53
LGI1O95970 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
LGI1O95970 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.35■□□□□ 0.53
LGI1O95970 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LGI1O95970 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGI1O95970 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGI1O95970 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LGI1O95970 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.34■□□□□ 0.53
LGI1O95970 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.34■□□□□ 0.53
LGI1O95970 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LGI1O95970 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.34■□□□□ 0.53
LGI1O95970 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI1O95970 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI1O95970 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.34■□□□□ 0.53
LGI1O95970 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.34■□□□□ 0.53
LGI1O95970 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.34■□□□□ 0.53
LGI1O95970 AC231657.2-201ENST00000624556 255 ntBASIC18.34■□□□□ 0.53
LGI1O95970 AC008694.1-202ENST00000636953 945 ntBASIC18.34■□□□□ 0.53
LGI1O95970 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LGI1O95970 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LGI1O95970 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LGI1O95970 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LGI1O95970 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.34■□□□□ 0.53
LGI1O95970 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LGI1O95970 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGI1O95970 AC005332.7-201ENST00000614046 2005 ntBASIC18.33■□□□□ 0.53
LGI1O95970 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGI1O95970 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
LGI1O95970 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGI1O95970 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGI1O95970 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.33■□□□□ 0.53
LGI1O95970 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGI1O95970 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.33■□□□□ 0.53
LGI1O95970 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.33■□□□□ 0.52
LGI1O95970 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.33■□□□□ 0.52
LGI1O95970 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.33■□□□□ 0.52
LGI1O95970 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LGI1O95970 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGI1O95970 AC093484.2-201ENST00000580996 2166 ntBASIC18.32■□□□□ 0.52
LGI1O95970 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.32■□□□□ 0.52
LGI1O95970 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGI1O95970 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGI1O95970 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGI1O95970 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGI1O95970 AL355472.2-201ENST00000422958 438 ntBASIC18.32■□□□□ 0.52
LGI1O95970 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.32■□□□□ 0.52
LGI1O95970 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.32■□□□□ 0.52
LGI1O95970 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.32■□□□□ 0.52
LGI1O95970 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.32■□□□□ 0.52
LGI1O95970 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.32■□□□□ 0.52
LGI1O95970 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms