Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CLSTN1O94985 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLSTN1O94985 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.97■■□□□ 1.11
CLSTN1O94985 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLSTN1O94985 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLSTN1O94985 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.97■■□□□ 1.11
CLSTN1O94985 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLSTN1O94985 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLSTN1O94985 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CLSTN1O94985 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLSTN1O94985 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CLSTN1O94985 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLSTN1O94985 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.97■■□□□ 1.11
CLSTN1O94985 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLSTN1O94985 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CLSTN1O94985 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.97■■□□□ 1.11
CLSTN1O94985 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLSTN1O94985 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.96■■□□□ 1.11
CLSTN1O94985 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CLSTN1O94985 AP005212.1-201ENST00000581547 1997 ntBASIC21.96■■□□□ 1.11
CLSTN1O94985 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 AC020763.4-201ENST00000623414 4170 ntBASIC21.96■■□□□ 1.11
CLSTN1O94985 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 NCF1B-203ENST00000435988 1254 ntBASIC21.96■■□□□ 1.11
CLSTN1O94985 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.96■■□□□ 1.11
CLSTN1O94985 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.96■■□□□ 1.11
CLSTN1O94985 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CLSTN1O94985 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.96■■□□□ 1.11
CLSTN1O94985 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.96■■□□□ 1.11
CLSTN1O94985 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.96■■□□□ 1.11
CLSTN1O94985 AL356652.1-201ENST00000615962 565 ntBASIC21.96■■□□□ 1.11
CLSTN1O94985 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.96■■□□□ 1.11
CLSTN1O94985 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.96■■□□□ 1.11
CLSTN1O94985 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CLSTN1O94985 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
CLSTN1O94985 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 AC087633.2-202ENST00000565166 1439 ntBASIC21.96■■□□□ 1.11
CLSTN1O94985 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.96■■□□□ 1.11
CLSTN1O94985 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLSTN1O94985 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
CLSTN1O94985 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CLSTN1O94985 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLSTN1O94985 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLSTN1O94985 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLSTN1O94985 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLSTN1O94985 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLSTN1O94985 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.95■■□□□ 1.1
CLSTN1O94985 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
CLSTN1O94985 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.95■■□□□ 1.1
CLSTN1O94985 CYP2T3P-201ENST00000601990 817 ntBASIC21.95■■□□□ 1.1
CLSTN1O94985 AL589743.5-201ENST00000616611 1050 ntBASIC21.95■■□□□ 1.1
CLSTN1O94985 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.95■■□□□ 1.1
CLSTN1O94985 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLSTN1O94985 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLSTN1O94985 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLSTN1O94985 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CLSTN1O94985 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLSTN1O94985 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLSTN1O94985 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CLSTN1O94985 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLSTN1O94985 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.94■■□□□ 1.1
CLSTN1O94985 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLSTN1O94985 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CLSTN1O94985 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.94■■□□□ 1.1
CLSTN1O94985 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLSTN1O94985 KRT18P68-201ENST00000392293 1000 ntBASIC21.94■■□□□ 1.1
CLSTN1O94985 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.94■■□□□ 1.1
CLSTN1O94985 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CLSTN1O94985 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLSTN1O94985 MIR2861-201ENST00000636310 90 ntBASIC21.94■■□□□ 1.1
CLSTN1O94985 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLSTN1O94985 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
CLSTN1O94985 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.94■■□□□ 1.1
CLSTN1O94985 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.94■■□□□ 1.1
CLSTN1O94985 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLSTN1O94985 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.94■■□□□ 1.1
CLSTN1O94985 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLSTN1O94985 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLSTN1O94985 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLSTN1O94985 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.94■■□□□ 1.1
CLSTN1O94985 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLSTN1O94985 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLSTN1O94985 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLSTN1O94985 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CLSTN1O94985 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLSTN1O94985 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.93■■□□□ 1.1
CLSTN1O94985 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLSTN1O94985 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.93■■□□□ 1.1
CLSTN1O94985 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLSTN1O94985 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.93■■□□□ 1.1
CLSTN1O94985 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.93■■□□□ 1.1
CLSTN1O94985 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms