Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.46■□□□□ 0.71
GFRA3O60609 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
GFRA3O60609 AC106795.1-205ENST00000512851 1056 ntBASIC19.46■□□□□ 0.71
GFRA3O60609 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.46■□□□□ 0.71
GFRA3O60609 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA3O60609 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.46■□□□□ 0.71
GFRA3O60609 SLC25A6P4-201ENST00000586535 553 ntBASIC19.46■□□□□ 0.71
GFRA3O60609 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA3O60609 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA3O60609 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
GFRA3O60609 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
GFRA3O60609 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.46■□□□□ 0.71
GFRA3O60609 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.46■□□□□ 0.71
GFRA3O60609 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA3O60609 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
GFRA3O60609 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA3O60609 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GFRA3O60609 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.45■□□□□ 0.7
GFRA3O60609 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA3O60609 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA3O60609 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA3O60609 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.45■□□□□ 0.7
GFRA3O60609 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.45■□□□□ 0.7
GFRA3O60609 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.45■□□□□ 0.7
GFRA3O60609 NUS1P1-201ENST00000446295 882 ntBASIC19.45■□□□□ 0.7
GFRA3O60609 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.45■□□□□ 0.7
GFRA3O60609 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.45■□□□□ 0.7
GFRA3O60609 AC092865.5-201ENST00000545435 363 ntBASIC19.45■□□□□ 0.7
GFRA3O60609 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.45■□□□□ 0.7
GFRA3O60609 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.45■□□□□ 0.7
GFRA3O60609 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.45■□□□□ 0.7
GFRA3O60609 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
GFRA3O60609 HYMAI.1-201ENST00000620949 238 ntBASIC19.45■□□□□ 0.7
GFRA3O60609 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA3O60609 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA3O60609 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA3O60609 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA3O60609 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.44■□□□□ 0.7
GFRA3O60609 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GFRA3O60609 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GFRA3O60609 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA3O60609 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA3O60609 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
GFRA3O60609 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA3O60609 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA3O60609 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA3O60609 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA3O60609 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
GFRA3O60609 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA3O60609 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.44■□□□□ 0.7
GFRA3O60609 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA3O60609 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA3O60609 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA3O60609 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
GFRA3O60609 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
GFRA3O60609 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.44■□□□□ 0.7
GFRA3O60609 RCC2P6-201ENST00000526625 1557 ntBASIC19.44■□□□□ 0.7
GFRA3O60609 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.44■□□□□ 0.7
GFRA3O60609 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA3O60609 KRT8P8-201ENST00000434750 1448 ntBASIC19.43■□□□□ 0.7
GFRA3O60609 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.43■□□□□ 0.7
GFRA3O60609 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GFRA3O60609 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
GFRA3O60609 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA3O60609 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA3O60609 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA3O60609 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GFRA3O60609 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.43■□□□□ 0.7
GFRA3O60609 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.43■□□□□ 0.7
GFRA3O60609 AL353719.1-201ENST00000566847 864 ntBASIC19.43■□□□□ 0.7
GFRA3O60609 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GFRA3O60609 AL023803.3-201ENST00000615559 522 ntBASIC19.43■□□□□ 0.7
GFRA3O60609 BX640515.1-201ENST00000617215 977 ntBASIC19.43■□□□□ 0.7
GFRA3O60609 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA3O60609 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.43■□□□□ 0.7
GFRA3O60609 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA3O60609 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.42■□□□□ 0.7
GFRA3O60609 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA3O60609 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.42■□□□□ 0.7
GFRA3O60609 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA3O60609 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA3O60609 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA3O60609 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GFRA3O60609 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA3O60609 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
GFRA3O60609 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.42■□□□□ 0.7
GFRA3O60609 TSSC2-201ENST00000450217 709 ntBASIC19.42■□□□□ 0.7
GFRA3O60609 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.42■□□□□ 0.7
GFRA3O60609 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.42■□□□□ 0.7
GFRA3O60609 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.42■□□□□ 0.7
GFRA3O60609 AP002469.2-201ENST00000531724 424 ntBASIC19.42■□□□□ 0.7
GFRA3O60609 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GFRA3O60609 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GFRA3O60609 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA3O60609 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.42■□□□□ 0.7
GFRA3O60609 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA3O60609 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA3O60609 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA3O60609 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA3O60609 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms