Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.94■□□□□ 0.46
ZIC3O60481 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.94■□□□□ 0.46
ZIC3O60481 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.94■□□□□ 0.46
ZIC3O60481 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.94■□□□□ 0.46
ZIC3O60481 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.94■□□□□ 0.46
ZIC3O60481 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.94■□□□□ 0.46
ZIC3O60481 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.94■□□□□ 0.46
ZIC3O60481 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ZIC3O60481 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.94■□□□□ 0.46
ZIC3O60481 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.94■□□□□ 0.46
ZIC3O60481 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 AC116351.2-201ENST00000606540 1585 ntBASIC17.94■□□□□ 0.46
ZIC3O60481 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ZIC3O60481 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 LINC01521-201ENST00000504184 1943 ntBASIC17.94■□□□□ 0.46
ZIC3O60481 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.94■□□□□ 0.46
ZIC3O60481 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.93■□□□□ 0.46
ZIC3O60481 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZIC3O60481 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.93■□□□□ 0.46
ZIC3O60481 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.93■□□□□ 0.46
ZIC3O60481 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ZIC3O60481 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZIC3O60481 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZIC3O60481 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.93■□□□□ 0.46
ZIC3O60481 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.93■□□□□ 0.46
ZIC3O60481 PRKY-204ENST00000533551 1019 ntBASIC17.93■□□□□ 0.46
ZIC3O60481 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.93■□□□□ 0.46
ZIC3O60481 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.93■□□□□ 0.46
ZIC3O60481 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
ZIC3O60481 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.93■□□□□ 0.46
ZIC3O60481 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZIC3O60481 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZIC3O60481 PHGDH-210ENST00000641115 1638 ntBASIC17.93■□□□□ 0.46
ZIC3O60481 AC018553.1-201ENST00000616682 1458 ntBASIC17.93■□□□□ 0.46
ZIC3O60481 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZIC3O60481 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZIC3O60481 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZIC3O60481 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZIC3O60481 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZIC3O60481 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZIC3O60481 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 TFP1-202ENST00000475455 1573 ntBASIC17.92■□□□□ 0.46
ZIC3O60481 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.92■□□□□ 0.46
ZIC3O60481 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ZIC3O60481 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ZIC3O60481 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 KRASP1-201ENST00000407852 552 ntBASIC17.92■□□□□ 0.46
ZIC3O60481 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.92■□□□□ 0.46
ZIC3O60481 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
ZIC3O60481 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.92■□□□□ 0.46
ZIC3O60481 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.92■□□□□ 0.46
ZIC3O60481 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.92■□□□□ 0.46
ZIC3O60481 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
ZIC3O60481 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.92■□□□□ 0.46
ZIC3O60481 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 AL691432.2-201ENST00000607222 2038 ntBASIC17.92■□□□□ 0.46
ZIC3O60481 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.92■□□□□ 0.46
ZIC3O60481 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ZIC3O60481 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZIC3O60481 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZIC3O60481 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZIC3O60481 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZIC3O60481 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZIC3O60481 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.91■□□□□ 0.46
ZIC3O60481 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.91■□□□□ 0.46
ZIC3O60481 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ZIC3O60481 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZIC3O60481 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.91■□□□□ 0.46
ZIC3O60481 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZIC3O60481 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.91■□□□□ 0.46
ZIC3O60481 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZIC3O60481 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZIC3O60481 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZIC3O60481 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZIC3O60481 AC239809.2-201ENST00000415381 517 ntBASIC17.91■□□□□ 0.46
ZIC3O60481 UBE2SP1-201ENST00000450587 669 ntBASIC17.91■□□□□ 0.46
ZIC3O60481 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.91■□□□□ 0.46
ZIC3O60481 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.91■□□□□ 0.46
ZIC3O60481 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.91■□□□□ 0.46
ZIC3O60481 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.91■□□□□ 0.46
ZIC3O60481 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZIC3O60481 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.91■□□□□ 0.46
ZIC3O60481 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms