Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.82■□□□□ 0.44
CXCL13O43927 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCL13O43927 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.82■□□□□ 0.44
CXCL13O43927 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.82■□□□□ 0.44
CXCL13O43927 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CXCL13O43927 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CXCL13O43927 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.82■□□□□ 0.44
CXCL13O43927 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CXCL13O43927 RN7SL471P-201ENST00000580476 299 ntBASIC17.82■□□□□ 0.44
CXCL13O43927 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CXCL13O43927 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCL13O43927 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.82■□□□□ 0.44
CXCL13O43927 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.82■□□□□ 0.44
CXCL13O43927 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CXCL13O43927 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.81■□□□□ 0.44
CXCL13O43927 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.81■□□□□ 0.44
CXCL13O43927 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.81■□□□□ 0.44
CXCL13O43927 AL162377.1-201ENST00000618844 1793 ntBASIC17.81■□□□□ 0.44
CXCL13O43927 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.81■□□□□ 0.44
CXCL13O43927 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCL13O43927 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.81■□□□□ 0.44
CXCL13O43927 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCL13O43927 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CXCL13O43927 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CXCL13O43927 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCL13O43927 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.81■□□□□ 0.44
CXCL13O43927 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CXCL13O43927 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.81■□□□□ 0.44
CXCL13O43927 AC098590.1-201ENST00000468126 897 ntBASIC17.81■□□□□ 0.44
CXCL13O43927 C1QBPP2-201ENST00000528754 825 ntBASIC17.81■□□□□ 0.44
CXCL13O43927 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.81■□□□□ 0.44
CXCL13O43927 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CXCL13O43927 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.81■□□□□ 0.44
CXCL13O43927 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CXCL13O43927 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CXCL13O43927 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CXCL13O43927 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.81■□□□□ 0.44
CXCL13O43927 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CXCL13O43927 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CXCL13O43927 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.8■□□□□ 0.44
CXCL13O43927 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL13O43927 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CXCL13O43927 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL13O43927 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CXCL13O43927 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL13O43927 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL13O43927 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.8■□□□□ 0.44
CXCL13O43927 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.8■□□□□ 0.44
CXCL13O43927 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.8■□□□□ 0.44
CXCL13O43927 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL13O43927 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL13O43927 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CXCL13O43927 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL13O43927 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.8■□□□□ 0.44
CXCL13O43927 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.8■□□□□ 0.44
CXCL13O43927 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL13O43927 AL158047.1-201ENST00000445918 881 ntBASIC17.8■□□□□ 0.44
CXCL13O43927 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CXCL13O43927 AC142381.4-202ENST00000563973 229 ntBASIC17.8■□□□□ 0.44
CXCL13O43927 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.8■□□□□ 0.44
CXCL13O43927 MTDHP1-201ENST00000605323 784 ntBASIC17.8■□□□□ 0.44
CXCL13O43927 AL121906.2-201ENST00000621597 723 ntBASIC17.8■□□□□ 0.44
CXCL13O43927 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CXCL13O43927 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CXCL13O43927 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CXCL13O43927 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL13O43927 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL13O43927 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL13O43927 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.79■□□□□ 0.44
CXCL13O43927 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.79■□□□□ 0.44
CXCL13O43927 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.79■□□□□ 0.44
CXCL13O43927 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.79■□□□□ 0.44
CXCL13O43927 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CXCL13O43927 PRKY-204ENST00000533551 1019 ntBASIC17.79■□□□□ 0.44
CXCL13O43927 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CXCL13O43927 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.79■□□□□ 0.44
CXCL13O43927 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CXCL13O43927 AL121829.2-201ENST00000620908 328 ntBASIC17.79■□□□□ 0.44
CXCL13O43927 AL023875.1-201ENST00000640777 796 ntBASIC17.79■□□□□ 0.44
CXCL13O43927 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.79■□□□□ 0.44
CXCL13O43927 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CXCL13O43927 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL13O43927 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CXCL13O43927 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.78■□□□□ 0.44
CXCL13O43927 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms